Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3429 ATGAAGATGGCCGCCAACATGCATCAACTACTCAGAAGCCTCTGTTTAAATACTGATTGGAAGTACGCCATCTTTTGGAAACTCAAACATCGTGCTCGGATGATCTTGACATGGGAGGATGCTTATTATGACAACCCCGATGATTATGACTCTTTAGACAATAAGTCCTGCCAGAAGACCTTGGAACAGATTCATGGTGGGCATTTTTCACATGACCCTCTTGGGTTAGCGGTAGCAAAGATGTCATATCATGTATATTCGTTAGGGGAAGGTATCATTGGACAGGTAGCTGTTACTGGAAAGCATCAGTGGATCTGTGCAGATAATCATGCTGCGGGTTCTGGTTCATCATTTGAGTTTGCTGATGGATGGCAATCTCAGTTTTCTGCTGGTATTAGGACAATCGTTGTTGTTGCTATAGTCCCACTTGGAGTTGTTCAGCTTGGCTCTTTAAATAAAGTGATTGAAGATATGGGGTTAGTAACTCATATCAGAAATATATTTTTGGCTACACAAGATTACTCGATAGACCATGGTTTAAGTCAAATACTTAGTGGTGTGAAGAATTCTTCATCACTGCCAGATGTATCCATGACAAAATCGTCTTCAGAAATTGTTCCTGCTCACTTACAAGCTACAGAGGAAGCCACAAAGACTGAAAAAATGGATATTTTGATGCCCTTTCCATGTTCTGGGAAGAACTTTTCACCTCGTGCTGTTTATAAGAAAATGGCTGTTGATGTTACCAAACACGGAAGGCCTGAGTTTTGCAGCAATAAAAGTTCTGTTTTGCTTCAGTCAGTATCAAATATGATGAATGTGGAGCATCAGAAAATTGTAGATCTGAGATCTCTAAATGAGAGAAAGTTTGAAGGGGACTGTAGTGGCTGCAAAGATGTTGTTAGGGTTGAATCAGAAAAAAATGTCACTTCATTGCTACAAAATTCATTCGTGGATAATAACAGCTTCAGTGATTTAATTTGTCCATATGAAAAAATTGGAGCTGATTTTGCGTGTTTCCATTCTGACTTTCCTGATGTTGTTGGTGAAAGTGATAAGTTACATTATCTAAATATTACCCAAAAAGAGGTGCTGAGTGTTCCCAGACCTTCAAATGCAAGCTCCCAGAAAGATACCGAGAAATCCGAGTTGCAGAACGAGCCTTGTTACAAGAGTCCCTCTTATTCATGGTTGAAGTTCCCTGCTGGCTGTGAGCTACATGAAGCACTTGGACCAGCTTTTATGAAAAGTAGATATTTAGACTCTGAGGCACAGATGAATCAAGATGTTAAAACCATGGAGATGCCAGATGAGATCAGCTGTAGCCAGTTGACTTGTGAATCTCGTCCCGAGCATCTTTTGGAAGCAATAGTGGCCAATGTTTGTCATAGTAATAATGACGTTAAGAGTGAGCTATCATATTCTACATCAGTGCAGTCTGCAATGGTATCCGAAAGAAATCCTGAAGCTTCTGTTCACACTGTGCACACTCTTAATTCAGAAGGTTATCCAATAGATCAGTCTTCTCTTGTTAGAGAGGACATATACTGCACTTTGACTTCATCTGGGAATTGTGGTGCGATGTCTCCCAGAGGTATTTCATCAATGTGTCCTAGTTCATGTAGTGAACAGTTTGAAAGGTCTTCTGAACCGAGTAAGAACAAGAAGAGGGCTAGGCCTGGGGAAAGTTGTAGGCCTAGGCCAAGGGATAGACAACTAATCCAAGATCGTATTAAGGAGTTGAGAGAATTGGTGCCAAGTGGAGCAAAGTGCAGTATTGATTCACTACTGGAGCGCACAATAAAGCACATGCTCTTTCTGCAGAGTATAACTAAGCATGCTGACAAGCTAAATAAATTTGCTGattcaaagacaaaggcaaagTTGCATCACATGGAATCAGCTGTTCCTGGATCCTCAAGTTACGAACAGGGTTCAAGTTGGGCAATGGAAGTAGGTGGTCATTTGAAAGTTCATTCAATATTAGTGGAGAATCTTAGCAAGAATGGACAGATGCTTGTTGAGATGCTATGCGAGGAGTGCAGCCATTTTTTGGAGATAGCTGAAGCCATTAGAAGCTTGGGCCTCACAATTTTGAAAGGTGCAACAGAAGCTCATGGGTCAAAACAACAAAAATGTACACAGATTGGATATCTTGTGGCCGCTTGTTCAAATACTACAGTCCAAAAATACAATGCATTCACAATAACTGGTGGGTTTACGCTGGACGTAAACTGCTCTAATGGTCCATATGCTCTACATTTCTGCCTTGGATATAATAGACATGCTGCTGATACCCTGGGTCCAACTCGTCCAGCCAGTACTCTATGCTCAACACTTTTGAACTTGTCATTGGTGATAAGctacacaaaaagaaaaagcaaTGATTTTGATGGAGGACTTGGAGGCCACCTACGGTATCTTGCAGTAGAAATGTTAGGGATGATGGGTCTGAATGCTTGGTGGTACCCCATAGCTTCTGACAGTAGTTCTGATACTGCGTCTCTCAGTTTCTTCATATGCTCAATGTATTGGCTAACTGTTTCTCTGCAGTCAAACAAGTGGGGAAGGTTTGAGGGTCGAGGGCACCATCTTGAAAGTCAAATAGTAAGGTGTCCCTCCAATTTGCTGCTTTGGAGACAAAGAGGTCTCCGTTGCAGAAATACCTTACCCTTACCTTGTGATCACGGGAATACCACTCCTTCTTCACCTCCTTTGGCTGCTCGTGGAATTGTCTGA 2739 0.4115 MKMAANMHQLLRSLCLNTDWKYAIFWKLKHRARMILTWEDAYYDNPDDYDSLDNKSCQKTLEQIHGGHFSHDPLGLAVAKMSYHVYSLGEGIIGQVAVTGKHQWICADNHAAGSGSSFEFADGWQSQFSAGIRTIVVVAIVPLGVVQLGSLNKVIEDMGLVTHIRNIFLATQDYSIDHGLSQILSGVKNSSSLPDVSMTKSSSEIVPAHLQATEEATKTEKMDILMPFPCSGKNFSPRAVYKKMAVDVTKHGRPEFCSNKSSVLLQSVSNMMNVEHQKIVDLRSLNERKFEGDCSGCKDVVRVESEKNVTSLLQNSFVDNNSFSDLICPYEKIGADFACFHSDFPDVVGESDKLHYLNITQKEVLSVPRPSNASSQKDTEKSELQNEPCYKSPSYSWLKFPAGCELHEALGPAFMKSRYLDSEAQMNQDVKTMEMPDEISCSQLTCESRPEHLLEAIVANVCHSNNDVKSELSYSTSVQSAMVSERNPEASVHTVHTLNSEGYPIDQSSLVREDIYCTLTSSGNCGAMSPRGISSMCPSSCSEQFERSSEPSKNKKRARPGESCRPRPRDRQLIQDRIKELRELVPSGAKCSIDSLLERTIKHMLFLQSITKHADKLNKFADSKTKAKLHHMESAVPGSSSYEQGSSWAMEVGGHLKVHSILVENLSKNGQMLVEMLCEECSHFLEIAEAIRSLGLTILKGATEAHGSKQQKCTQIGYLVAACSNTTVQKYNAFTITGGFTLDVNCSNGPYALHFCLGYNRHAADTLGPTRPASTLCSTLLNLSLVISYTKRKSNDFDGGLGGHLRYLAVEMLGMMGLNAWWYPIASDSSSDTASLSFFICSMYWLTVSLQSNKWGRFEGRGHHLESQIVRCPSNLLLWRQRGLRCRNTLPLPCDHGNTTPSSPPLAARGIV 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3429 912 MobiDBLite consensus disorder prediction 548 571 - -
Sto13g3429 912 MobiDBLite consensus disorder prediction 544 571 - -
Sto13g3429 912 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 168 IPR025610 -
Sto13g3429 912 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 3 714 IPR043561 GO:0003700|GO:0006355
Sto13g3429 912 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 558 607 IPR011598 GO:0046983
Sto13g3429 912 MobiDBLite consensus disorder prediction 367 389 - -
Sto13g3429 912 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 3 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3429 Sto-Chr13 37376029 37383552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3429 3 717 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 42.490 1.97e-157 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3429 - - ccaj:109796613 949.118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0691 8 4312081 4330854 Sto13g3429 13 37376029 37383552 CCT
Sto13g3429 13 37376029 37383552 Sto13g3429 13 37376029 37383552 ECH