Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3418 ATGGATTTAGATTCTTGCGTCTTCCAATTCCCAAAAAAAGAGGAGGATGATCAGTTGTTATGGTGTTTTTGCCCTCAAAATTCATGTGTTTGTGGACAATCATTCTTCTCCTGGGATgacttcttttccttcaacgAATCCAATTACTCCTCCCAATCCAATTCTTGCTCTAATTCTTCTTCTAATTATAATTCTTGTTCTGAATCCCAAGAAGTGTCGTCCCAATTGGAACAAAGTAATGGTAAGAAAGAGAAGAGGGCGTACAGAGGAGTTAGGAGACGGCCTTGGGGGAAATTCGCGGCGGAGATAAGGGACTCCACTAGAAATGGGGTAAGAGTGTGGATCGGAACATTCGAGACGGCGGAGGCGGCGGCTCTAGCGTATGACCAAGCGGCGTTCTCCATGAAGGGGTCACAGGCGGTGCTGAATTTCCCGGAGCACGTGGTGAGGGAGTCACTAGAAAGCATGCCTCGCAAGCCATGGGAAGATGGTTCATCTCCTGTCTTGGCACTCAAGAGGAAGCACAGCTTGAGAACAAAGTCCAAGTCCAAGTCCATTCATAACAAGGGCTTCAAGGCTCAATGCCAATCCCAATCacaaccaaataataataataataataatgtgctGGTGTTGGAGGATTTGGCAATCATCGTCGCTGGAATGGGCTTCTTCACCGATGCCTACGATCTCTTTTGCATATCTCTCATCACTAAGTTGCTGGGCCGTTTATACTACCATGTCGAAGGTGCAGGCAAGCCCGGCACTTTGCCTCCCAATGTGTCCGCCGCCGTGAATGGCGTCGCATTCTGTGGAACCATCACCGGGCAGCTCTTCTTCGGGTGGCTGGGCGACAAAATGGGGCGAAAGAAAGTGTACGGTATGACCCTTTTGATGATGGTGATATGCTCCATCGCTTCGGGTCTCTCCTTCGGACACACTCCCAAATCTGTGATGGCCACTCTCTGCTTCTTCCGATTCTGGCTTGGCTTCGGTATTGGCGGAGACTACCCACTCTCCGCCACCATCATGTCAGAGTATTCCAATAAGAAGACTCGCGGTGCCTTCGTTGCTGCTGTTTTCGCGATGCAGGGTTTTGGAATCCTGGCTGCTGGTGTTGTTGCTATTATCGTCTCCTGGGCTTTCAACGCTAAGTACAATGCTCCACCTTACGAGGTTGATCCAATTGCCTCAACGATTCCACAAGCAGATTTCATATGGAGGCTTATCCTCATGTTTGGGGCTTTCCCTGCTGCTCTGACTTACTATTGGAGGCAGAAGATGCCTGAGACTGCTCGTTATACAGCACTTGTGGCTAAGAACACTGAGAAAGCTGCTGCTGATATGTCCAAGGTTCTTCAAATGGAAATTGAAGCTGAGCCTGAGAAAGATGAGTCTCAGGCTAAACTCTATGGCTTGTTCTCCAAGGAGTTCATGAGTCGTCATGGCCTTCATTTGCTTGGCACAACAAGCACCTGGTTCTTGCTTGACATTGCATTTTACAGCCAAAATCTGTTCCAGAAAGATATCTTCAGTGCTGTGGGCTGGATTCCTCCTGCCAAAACCATGAATGCAGTTGAGGAGATGTTCTTTATTTCTAAGGCTCAGACCTTGATTGCTCTCTGCAGTTCTGTTCCGGGGTATTGGTTTACTGTTGCTTTCATTGATAGACTGGGAAGGTTTTGGATTCAACTGAGTGGATTCTTCTTCATGACGGTCTTTATGTTTGCTCTTGCCATTCCTTATGATCATTGGACTAAGAGGGAAAACAGAATTGGATTTGTGGTCATGTATTCCCTCACTTTCTTCTTTGCCAATTTTGGGCCCAATGCCACCACATTTGTTGTGCCGGCGGAGATTTTTCCGGCTAGATTCCGATCTACTTGCCATGGGATATCAGCGGCATGGGGGAAGCTGGGGGCTATTGTGGGTGCATTTGGGTTCTTGTATTTGGCGCAGGACAAGGACAAGAGTAAGGCCGAGGCAGGCTACCCTGCGGGTATTGGAGTGAAGAATGCACTTATTGTGTTAGGCGTGGTTAACGTTTTGGGTTTCTTCTTTACTTTCTTGGTGCCTGAGACAAAGGGAAAATCCTTGGAAGATATATCGGGTGAAAATAATGAGGACGAAGCAACTAGAGAAAATCCCTAG 2151 0.4677 MDLDSCVFQFPKKEEDDQLLWCFCPQNSCVCGQSFFSWDDFFSFNESNYSSQSNSCSNSSSNYNSCSESQEVSSQLEQSNGKKEKRAYRGVRRRPWGKFAAEIRDSTRNGVRVWIGTFETAEAAALAYDQAAFSMKGSQAVLNFPEHVVRESLESMPRKPWEDGSSPVLALKRKHSLRTKSKSKSIHNKGFKAQCQSQSQPNNNNNNNVLVLEDLAIIVAGMGFFTDAYDLFCISLITKLLGRLYYHVEGAGKPGTLPPNVSAAVNGVAFCGTITGQLFFGWLGDKMGRKKVYGMTLLMMVICSIASGLSFGHTPKSVMATLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFVAAVFAMQGFGILAAGVVAIIVSWAFNAKYNAPPYEVDPIASTIPQADFIWRLILMFGAFPAALTYYWRQKMPETARYTALVAKNTEKAAADMSKVLQMEIEAEPEKDESQAKLYGLFSKEFMSRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPPAKTMNAVEEMFFISKAQTLIALCSSVPGYWFTVAFIDRLGRFWIQLSGFFFMTVFMFALAIPYDHWTKRENRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISAAWGKLGAIVGAFGFLYLAQDKDKSKAEAGYPAGIGVKNALIVLGVVNVLGFFFTFLVPETKGKSLEDISGENNEDEATRENP 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3418 716 Gene3D AP2/ERF domain 87 147 IPR036955 GO:0003700|GO:0006355
Sto13g3418 716 CDD AP2 88 147 IPR001471 GO:0003700|GO:0006355
Sto13g3418 716 Gene3D MFS general substrate transporter like domains 215 716 IPR036259 -
Sto13g3418 716 MobiDBLite consensus disorder prediction 188 203 - -
Sto13g3418 716 ProSiteProfiles Major facilitator superfamily (MFS) profile. 216 696 IPR020846 GO:0022857
Sto13g3418 716 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 215 712 - -
Sto13g3418 716 MobiDBLite consensus disorder prediction 178 203 - -
Sto13g3418 716 SMART rav1_2 87 151 IPR001471 GO:0003700|GO:0006355
Sto13g3418 716 SUPERFAMILY DNA-binding domain 87 146 IPR016177 GO:0003677
Sto13g3418 716 ProSiteProfiles AP2/ERF domain profile. 87 145 IPR001471 GO:0003700|GO:0006355
Sto13g3418 716 TIGRFAM 2A0109: phosphate:H+ symporter 216 705 IPR004738 GO:0005315|GO:0006817|GO:0016021
Sto13g3418 716 Pfam Sugar (and other) transporter 218 703 IPR005828 GO:0016021|GO:0022857|GO:0055085
Sto13g3418 716 PRINTS Ethylene responsive element binding protein signature 88 99 IPR001471 GO:0003700|GO:0006355
Sto13g3418 716 PRINTS Ethylene responsive element binding protein signature 111 127 IPR001471 GO:0003700|GO:0006355
Sto13g3418 716 Pfam AP2 domain 88 137 IPR001471 GO:0003700|GO:0006355
Sto13g3418 716 SUPERFAMILY MFS general substrate transporter 214 703 IPR036259 -
Sto13g3418 716 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-7-RELATED 215 712 - -
Sto13g3418 716 CDD MFS_PhT 217 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3418 Sto-Chr13 37312380 37317120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3418 216 710 Inorganic Solute Cotransporters AT3G54700 80.808 0.0 854
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto13g3418 Sugar_tr 9.3e-47 CL0015
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3418 K08176 - gmx:100803626 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0699 8 4391039 4392479 Sto13g3418 13 37312380 37317120 CCT
Sto13g3418 13 37312380 37317120 Sto13g3418 13 37312380 37317120 ECH