Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3406 ATGGCTTCGCTCTCAGCAAGGTTTCGTTACCTGTTTCACAAGTTAGATTACTCCACCGCACTCACTTTCAAGAGTCACCAACAAAGTCGAATAGCAGGCATAAACATAGCTAGCACTCTTTGGAAGAATTTCCTTGGAAAATTGACATACTTGCACTGTAATGAAGGAGAGGAGATGGCCCCAACTATAACTGGAAATGGAGTAACTCTTGTTCGGAAGTTACCACTAGTAGACCCAATGCGTGTTTCTGTAGGGGATGTGGTGGTCTTTAATGACCCTGAGAATAAAGGTAGGTTTTTAATAAGAAGATTAGCTGCCATGGAAGGCAATGAAATGGTTTCTTCTGATGAAAATGATGAACCCTTTACTCTTGAGAAGAATGAATGCTGGGTGACGGCTGACAATGAAAGTATGGATCCTAAGGAAGCAAATGACAGTCGAGTATTTGGTCCAATTAAGATGACAAATATTGTAGGCAGAGTCATATATTCCATGCAAACTGTTGTAGACCATGGCCCCGTATTGAACAGTGATATCAGCCAGCAAACTGATTCATCAGTACTGGCAGTGGAACTGGATGTTGACGAGATGGCAAGAAACCTCAAATCATGA 612 0.4183 MASLSARFRYLFHKLDYSTALTFKSHQQSRIAGINIASTLWKNFLGKLTYLHCNEGEEMAPTITGNGVTLVRKLPLVDPMRVSVGDVVVFNDPENKGRFLIRRLAAMEGNEMVSSDENDEPFTLEKNECWVTADNESMDPKEANDSRVFGPIKMTNIVGRVIYSMQTVVDHGPVLNSDISQQTDSSVLAVELDVDEMARNLKS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3406 203 CDD S26_SPase_I 55 161 IPR019533 GO:0004252|GO:0006465
Sto13g3406 203 PANTHER OSJNBA0068L06.9 PROTEIN 1 202 - -
Sto13g3406 203 SUPERFAMILY LexA/Signal peptidase 56 165 IPR036286 -
Sto13g3406 203 Gene3D Umud Fragment, subunit A 51 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3406 Sto-Chr13 37259723 37262190 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3406 59 174 MADS-box Gene Family AT1G29960 29.752 2.32e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3406 - - ming:122070625 259.225