Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3405 ATGGTTGACAAAGCTGTTGCACTTCTGGCAAACCTATCAACAATTGCAGAGGGGAGATTAGCAATTGCAAGAGAAGGAGGTATTCCCTTACTAGTTGAAATTGTTGAATCCGGGTCCCGTAGAGGAAAGGAAAATGCTGCCTCCATTCTTTTGCAACTATGCCTTCACAATTCCAAGTATTGTACACTGGTTCTTCAAGAAGGAGCTGTACCACCACTAGTTGCATTATCTCAATCTGGCACACCAAGAGCAAAGGAAAAGGTATGA 267 0.4307 MVDKAVALLANLSTIAEGRLAIAREGGIPLLVEIVESGSRRGKENAASILLQLCLHNSKYCTLVLQEGAVPPLVALSQSGTPRAKEKV 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3405 88 PANTHER U BOX DOMAIN-CONTAINING 1 87 - -
Sto13g3405 88 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 3 1 87 - -
Sto13g3405 88 Gene3D - 1 88 IPR011989 -
Sto13g3405 88 SUPERFAMILY ARM repeat 4 87 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3405 Sto-Chr13 37254149 37254415 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3405 1 87 U-box Gene Family AT3G54790 81.609 1.49e-42 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3405 - - qsu:112019258 157.532