Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3396 ATGGCCGACGACGAGGGAGCTCGGAGGCCGAGAGgcgaagagaaggaagaagatgaaaatgaaaGTTGCAGAGGAATTAGAGTGCAGGGCATGCAATTCACCTACGATGGCCAACCACCACTCTTCGTCGACTTCAACCTGAAGATCTCTCCCGGATCGCGATGCCTTCTGGTTGGTGCCAATGGATCCGGGAAGACCACTTTGCTGAAAATTCTGGCTGGCAAGCATATGGTTGGAGGAAGAGATGTTGTGCGGGTTTTAAATGGTTCCGCATTTCATGATACTCAACTGGTTTGTAGTGGTGATCTCGCTTATTTGGGAGGATCCTGGAGTAAAACCGTTGGCTCAGCTGGAGAAATTCCGCTCCAAGGAGACTTCTCGGCTGAACATATGATCTTTGGAGTTGAGGGCACAGATCCTGAAAGGAGAGAAAAGTTGATTGAGATGCTTGATATAGATCTACAGTGGCGAATGCATAAGGTATCTGATGGGCAGCGACGCCGAGTGCAAATCTGCATGGGTCTTCTTCATCCATACAAGGTGCTCTTGCTAGATGAGGTTACTGTTGATCTAGATGTTGTTACTAGGATGGATTTGCTGGACTTCTTCAGGGAAGAATGTGAACAGAGAGGAGCTACTATtgtatatgcaactcatatttTTGATGGACTGGAGACTTGGGCAACTCATCTGGCATACATACAAGATGGTGAACTGAGGAGAGCAGAAAAGTTATCAGATGTCAGTGAGTTGAAGCGTTCCTCTAATCTGCTCTCTGTTGTTGAGTCTTGGCTCCGTTCTGAAACAAAGCTTGAAAAGAAGAATCCTGTTAACACTGCTTCCCATGTCCAAAAGACATCATCTGGTAgttctccttttttttcatcaagACACATGGCATACTATCGGTAG 912 0.4353 MADDEGARRPRGEEKEEDENESCRGIRVQGMQFTYDGQPPLFVDFNLKISPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVRVLNGSAFHDTQLVCSGDLAYLGGSWSKTVGSAGEIPLQGDFSAEHMIFGVEGTDPERREKLIEMLDIDLQWRMHKVSDGQRRRVQICMGLLHPYKVLLLDEVTVDLDVVTRMDLLDFFREECEQRGATIVYATHIFDGLETWATHLAYIQDGELRRAEKLSDVSELKRSSNLLSVVESWLRSETKLEKKNPVNTASHVQKTSSGSSPFFSSRHMAYYR 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3396 303 Pfam ABC transporter 44 188 IPR003439 GO:0005524
Sto13g3396 303 PANTHER ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED 20 303 - -
Sto13g3396 303 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 250 IPR027417 -
Sto13g3396 303 Gene3D - 24 284 IPR027417 -
Sto13g3396 303 SMART AAA_5 51 255 IPR003593 -
Sto13g3396 303 PANTHER ABC TRANSPORTER I FAMILY MEMBER 21 20 303 - -
Sto13g3396 303 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 26 261 IPR003439 GO:0005524
Sto13g3396 303 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3396 Sto-Chr13 37196518 37199066 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3396 11 239 Calmodulin-binding Proteins AT2G36910 21.687 3.58e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3396 K12608 - gmx:100788503 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3396 13 37196518 37199066 Sto13g3396 13 37196518 37199066 ECH