Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3395 ATGGATTCTGCGAGGAGCTGGTTGCAGAAGTTACAGCCAAGAGATAAAATGAGGTCATCTTCAAAGAAAAAGGAGGATAGTGCTGGAGTAGATTCAAATGAACCGCTGGATGAAGAAGCTCTTTCCAATATCACGAAGCAGAAGGTGGCTGCGGCAAAGCAGTATATTGAGAACCATTACAAGGAGCAAATGAAGAACCTTCAGGAGAGGAAGGAACgTCGAACTTTCTTGGAAAAGAAGTTGGCTGATGCTGAAGTCTCAGAGGAAGATCAAAACAACCTGCTTAAGTTTTTAGAGAAAAAGGAGACAGAATATATGCGCCTTCAGAGGCATAAGATGGGTGTTGATGATTTTGAGTTATTAACTATGATTGGAAAAGGAGCATTTGGGGagGTCAGAGTCTGCAGGGAAAAGACAACGGGTCATGTATATGCAATGAAAAAGCTAAAGAAATCAGAGATGCTTCGTAGAGGCCAGGTAGAACATGTCAGAGCTGAAAGGAACCTCCTTGCTGAGGTTGACAGCAATTGCATAGTCAAACTTTATTGTTCCTTCCAAGATGATGAGTATCTGTATCTTATTATGGAGTATCTACCGGGTGGGGATATGATGACCCTTCTCATGAGAAAGGATACCTTGACTGAAGATGAAGCCAGATTTTATGTTGGAGAAACAGTTCTGGCTATTGAATCTATACATAAACACAATTATATCCATCGGGATATCAAGCCTGATAACCTGTTACTTGATAAATATGGACACTTGAGACTTTCAGATTTTGGACTTTGCAAACCATTAGATTGCAGTACGCTCCAAGAACAGGATTTTTCAGTAGGTCAGAATGCAAATGGATCTACACAGAATGATGAACGGTCAGCTCCAAAACGTACACAACAAGAACAACTACAACACTGGCAAAAGAACAGAAGGACACTTGCTTATTCTACTGTTGGCACACCTGATTATATTGCTCCAGAGGTTCTACTGAAGAAAGGTTATGGAATGGAATGTGACTGGCTGGGATCAAATGGTGCTGATGAAATAAAGGTTCATACATTCTTCAAAGGTATTGAATGGGATAAACTATATGAAATAGAAGCTGCATTCATTCCTGAGGTCAATGATGAATTAGATACTCAAAATTTCGAAAAGTTTGAAGAGGCAGACATCCAGAATCACCAAGCATCAAGAGCCGGTCCTTGGAGGAAGatgCTCTCATCTAAGGACTTAAATTTTGTTGGATACACATACAAGAACTTTGAAATTGTCAATGACTATCAAGTTCCTGGGATGGCTGAATTGAAGAGGAAATCTTCCAAACCAAAGAGGCCATCTATCAAGTCACTTTTTGGTGCTAACTTCGGCACAAATCTGAGAAGAACAACTAATTACATTTCCTACTGGTGGCGTGTTGAAGGTCTTCTCATAATGGATCATGTGATTGCTGGGAAGTTTAAACTAGGAAGGAAAATTGGCAGTGGATCTTTTGGGGAGCTGTATTTAGGTGTTAATGTACAAACTGGAGAGGAGGTAGCTGTTAAGCTGGAACCTGCAAAGAGCAAGCATCCGCAGCTACACTATGAGTCAAAGATATATATGCTTCTTCAAGGAGGCACGGGGGTTCCTCACCTCAAGTGGTTTGGAATTGAGGGAGACTACAATGTTATGGTTATTGACCTTCTTGGTCCAAGCTTGGAAGATCTGTTCAATTATTGCAATCGGAAGTTCACGCTTAAGACAGTGTTGATGCTTGCTGATCAGTTAATTAACCGAGTTGAATATATGCATTCAAGAGGTTTTCTTCACCGTGACATAAAGCCTGACAATTTTTTAATGGGCCTAGGGCGCAAAGCAAACCAGGTTTACATCATTGATTATGGTCTTGCAAAAAAGTATAGGGATCTTCAGACTCATAAGCATATACCGTACAGGGAAAACAAGAACCTCACTGGCACAGCTCGCTATGCAAGTGTCAATACTCATCTTGGAATTGAACAAAGCAGAAGAGATGATCTGGAATCTCTTGGTTATGTGCTCATGTACTTCTTAAGAGGAAGtcttcCCTGGCAAGGTCTAAAGGCTGGCACCAAAAAACAGAAGTATGATAAGATCAGCGAGAAGAAATCAACAACCCCAATAGAGGTGCTCTGCAAAACATATCCATCTGAGTTTGTATCGTTCTTCCACTACTGCCGATCATTGCGGTTTGAGGATAAGCCAGATTATTCTTATTTAAAGAGGCTTTTCCGGGACTTGTTTATTCGAGAAGGCTATCAGTTTGACTATGTTTTTGACTGGACTATATTGAAGTATCCACAGATTGGTGGCAGCTCTAAAGGGCGGCATGGCACTGGCAAGGCACTTCTGAATCCAGGACCATCTGTACAAAAGCCAGAAAAGATCCCAGCTGGGAAAGATATTCGAGAGAAATTTTCTGGTGCTACTGAAGCATTTTCCAGGAGGAATCCCACTGGTTCCAGTCCTTATGGAGATCACAACAAAAATAGGACTTCTGAGGATGTACCATCACACAAGGATGTGTACGACCAAGAGAAGGGGCGCAGTTCCTCTCGGTATGGCAGCACTTCAAGAAAAGCCATAATCTCATCAAACAAGCCAAGTTCCTCAGCTGATCATAGTGATATTCGTACCGGCCGGCTGACTTCGAGTAGTAGCCGCCCGTCTAGCACATATAGAACTCAGCCTGTGCATGacaccaaacaatcatctttaACCCGCAATGGATCTACAAGACTCAATCGTGATGATCCTCTTCGGAGCTTTGAGCTCCTCTCTCTTAGGAAGTAA 2808 0.4149 MDSARSWLQKLQPRDKMRSSSKKKEDSAGVDSNEPLDEEALSNITKQKVAAAKQYIENHYKEQMKNLQERKERRTFLEKKLADAEVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLQEQDFSVGQNANGSTQNDERSAPKRTQQEQLQHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWLGSNGADEIKVHTFFKGIEWDKLYEIEAAFIPEVNDELDTQNFEKFEEADIQNHQASRAGPWRKMLSSKDLNFVGYTYKNFEIVNDYQVPGMAELKRKSSKPKRPSIKSLFGANFGTNLRRTTNYISYWWRVEGLLIMDHVIAGKFKLGRKIGSGSFGELYLGVNVQTGEEVAVKLEPAKSKHPQLHYESKIYMLLQGGTGVPHLKWFGIEGDYNVMVIDLLGPSLEDLFNYCNRKFTLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKSTTPIEVLCKTYPSEFVSFFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGGSSKGRHGTGKALLNPGPSVQKPEKIPAGKDIREKFSGATEAFSRRNPTGSSPYGDHNKNRTSEDVPSHKDVYDQEKGRSSSRYGSTSRKAIISSNKPSSSADHSDIRTGRLTSSSSRPSSTYRTQPVHDTKQSSLTRNGSTRLNRDDPLRSFELLSLRK 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3395 935 CDD STKc_CK1_delta_epsilon 484 758 - -
Sto13g3395 935 MobiDBLite consensus disorder prediction 801 815 - -
Sto13g3395 935 MobiDBLite consensus disorder prediction 1 42 - -
Sto13g3395 935 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524
Sto13g3395 935 SUPERFAMILY Protein kinase-like (PK-like) 100 339 IPR011009 -
Sto13g3395 935 Pfam Protein kinase C terminal domain 373 417 IPR017892 GO:0004674|GO:0005524|GO:0006468
Sto13g3395 935 MobiDBLite consensus disorder prediction 9 31 - -
Sto13g3395 935 MobiDBLite consensus disorder prediction 777 923 - -
Sto13g3395 935 MobiDBLite consensus disorder prediction 279 301 - -
Sto13g3395 935 Gene3D Phosphorylase Kinase; domain 1 108 203 - -
Sto13g3395 935 PANTHER SERINE/THREONINE-PROTEIN KINASE 28 339 - -
Sto13g3395 935 PANTHER SERINE/THREONINE-PROTEIN KINASE 340 457 - -
Sto13g3395 935 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Sto13g3395 935 SMART serkin_6 118 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3395 935 SMART serkin_6 485 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3395 935 ProSitePatterns Protein kinases ATP-binding region signature. 491 514 IPR017441 GO:0005524
Sto13g3395 935 ProSiteProfiles Protein kinase domain profile. 485 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3395 935 Coils Coil 60 101 - -
Sto13g3395 935 SMART pkinase_C_6 355 419 IPR000961 GO:0004674|GO:0005524|GO:0006468
Sto13g3395 935 Gene3D Transferase(Phosphotransferase) domain 1 469 790 - -
Sto13g3395 935 SUPERFAMILY Protein kinase-like (PK-like) 480 766 IPR011009 -
Sto13g3395 935 MobiDBLite consensus disorder prediction 854 918 - -
Sto13g3395 935 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 340 457 - -
Sto13g3395 935 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 28 339 - -
Sto13g3395 935 MobiDBLite consensus disorder prediction 817 832 - -
Sto13g3395 935 ProSitePatterns Serine/Threonine protein kinases active-site signature. 600 612 IPR008271 GO:0004672|GO:0006468
Sto13g3395 935 ProSiteProfiles Protein kinase domain profile. 118 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3395 935 ProSiteProfiles AGC-kinase C-terminal domain profile. 355 427 IPR000961 GO:0004674|GO:0005524|GO:0006468
Sto13g3395 935 Pfam Protein kinase domain 486 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3395 935 Pfam Protein kinase domain 119 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3395 935 Gene3D Transferase(Phosphotransferase) domain 1 204 341 - -
Sto13g3395 935 MobiDBLite consensus disorder prediction 833 853 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3395 Sto-Chr13 37175647 37191965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3395 38 450 AGC Kinase Gene Family AT4G14350 67.227 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Sto13g3395 Pkinase 6.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3395 K08960 - gmx:100781494 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3395 13 37175647 37191965 Sto8g0724 8 4562355 4573807 CCT
Sto13g3395 13 37175647 37191965 Sto13g3395 13 37175647 37191965 ECH