Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3385 ATGAAGAAAGTATTTCAGCTTACGCTTCTCTCTCTAATTTTGCTGGCTATACTTGCAGATTTTTCATCACAGAAAGAAGCAGAAGCTCTGATAAACTGGATGAACAGTTTGAACTCCAACTCCTCTTTACTTTCATGGAATCTTTCAAATACCAGCAGCAGCACTCCATGCAAATGGACAGGCATTACTTGTGGTGAAGATGGAAGTGTTATTGAGATAAACCTTCCGAGTTCAGGCCTTGATGGGACCCTTAGCAGGTTTGACTTCTCTGCCTTTCCCAATCTCACTTCCTTGAATCTCAATTTGAACAACCTGGTGGGGGAAATCCCATCTGGAATTGGAAATGCAACAAAGCTGAAAATGCTTGATTTGAGTAGCAACAACTTCACAAACCCAATCCCTTCCGAAATAGGAAACCTCTTAGACCTCCAAGTTCTTCGTCTCTATAACAACTCACTCCTAAAACAAATGCCATTTCAACTCAGTAATTTGCAGAAGTTATGGCTTCTTGATGTAGGGGCAAATTATCTTGAGAATCCTGACCCAGCTCAGTTCAAGGGCATGGCTTCTATAACAGAACTTTGGCTTACGTACAATTTTTTCACTGAAGTTCCTTTGTTTGTTTTTCGCTGTCCTAAGTTAATGTTTCTCGACCTGTCAAACAATATTATCACAGGACAGATTCCAATGCACTCATTTGTTAGTCTCAAAAATCTTACATACCTAAACTTGACAAATAACCAATTTGAAGGGTTGATTCCATCAGAAATTCAAAACCTTTTGAACCTTAAACACCTGAAGCTTGGTCAAAACAAGCTGAATGGCACTATACCAGAGGAAATTGGATTTTTGTCAAACCTTGAGGAGCTTGAGTTGCATGAAAACCTTTTTCATGGTCCAATACCATCATCAATTAAAAATCTTCGCAAGCTTGAGAGTTTGAACCTTAAGAATGCAGGGTTGAATTCTAGCATCCCAGATGAGATAGGCTCCTGCATCAGCCTTACTTATATTGACATGTCAGGAAATAACTTGACAGGTGCATTGCCTCTTTCCATGGCCTCATTAACAAAAATCAGAGAGTTGGGAATTTCTGATAATCATTTATCTGGGGAACTTCATCCTTTTCTCCTGTCCAATTGGTCAAAACTCATCTCTCTGCAACTCCAAATGAACGACCTTTCAGGGACACTTTCACCTGAGGTTGGTTCACTTCACAATTTAACCCTCTTGTTCCTATATCAGAACAAGTTTTCAGGTTTGATTCCTCtagaaattggaaacttatTGAACTTGGAAAATCTTGAACTATCCAACAATTTTTTCAATGGTTCCATCCCACCAACCATTGGAAAGTTACACAAGCTCACCACATTAGGCCTGGCCTCAAACCAACTCAGTGGAGTTATTCCTTCTGAAATAGGTGATATGGAAAGCATAGAAGTTTTGGACTTAAGCGAAAACAAGCTTGCAGGGACTTTGCCCTCGTCCATAACTCAATTGGCAAACATCAATCtcctttatctttctttcaACAACTTCTCGGGAAGCATTCCTGAAGACTTTGGCCCTATCTTGTTGAGAAATCTAAGCTTTGCCGGGAACAGATTTTCTGGGAAGCTCCCTCCTGGAATTTGCAAGGGAGGGAACCTCATCTACTTAGCTGCAAGTGAAAATAATCTAGAGGGTCCAATCCCAGACAGTCTGAGAAACTGCACTAAACTGAATAGAGTCTTGCTTGGAAAGAACTTTCTCAGTGGAGACATCACCAATGCATTTGGCATATACCCTGACTTGGATTTCATTGATTTAGGAGATAATCAGCTTTCTGGGATGTTATCAAGAAACTGGGGAGAGTGCAAAAATCTTGGAAGTTTCAGCATAGCTGTTAATAGAGTAAAGGGTAATATCCCTCCGGAGTTTGGGAAATTGCCAAAGTTGCAAACTCTTGATCTTTCTGATAACAATCTCACAGGGAATATCCCATTGGAGCTCCTTAGCTCATCTTCCATACTACTCAAACTTAACTTGAGCAATAATAAGCTCTCAGGTCAGGTCCCTGCAGAAATAGGAGAACTTTCACGGCTTCAATTCTTGGATTTGTCAGCAAACAACCTAAGTGGACCAATTCCTAAAAGATTAGGTAACTGCCAGGCTCTAATATCTTTGAAACTGGCTATGAACAAATTGGATGGGCATATACCTAATGAGCTTGGGAATTTGGTCTCCTTGCAGCCTTTGTTAGATCTCAGTTATAACTCACTTAGTGGAGAGATGATACCAGAGCTAGGGAAATTAACAGCACTTGAAGTTCTCAATCTTTCTCATAATCAGCTATCTGGGACAATACCTTCTGCTCTTGAACAACTTGTAAGCCTTCAGTTAGTTGACTTATCCTACAACAAACTTGAAGGTCCCATCGTAGACCAAGAAGCTTTTCTTAAAGCTCCAGCAGAAGCACTTGTAGGTAATGCTCTTTGCGGTGAAAATGCATACTTGAGCCCTTGCAATGGCCACACTTTATCTGAAAATCACAAGAAAAACAGAAGATGGAAACTGATGATCTCTATATTCATCCCACTCGCTGCTTTAATCATTCTATTGGTTTTCCTTGGAATCTTCATCTTCCACCGTTATTATAAAGTTGATCAAGATGACAAGAGTGTGAGTGAATATAACTCATTCTTCACATGGAATCATTGGAAAAAAGTAGAGTTCAAGGATATCCGTATTGCAACAGAAAATTTCAGTGACAAGTATTGCATAGGAGAAGGAGGGCAAGGTAGTGTCTACAAGGCAGTGCTTCCAAGTGGTGAGATATTTGCAGTTAAGCGTCTACACCAAGACGAGGAAATGAAATTATCTAAAAGCCAGATGAAGAATTTCATGTCTGAAATTCAAGCGTTAACAAATATTCGCCACCGAAATATTGTAAAAATGTGTGGGTTCAGCCGCTTAGACAGGTCAATGTTCTTCACATACGAGTTTGTAGAAAGGGGCTCTTTGGAAAAACTATTGCAGGATGATGAGAAGGCAAAGATCTTGACTTGGGATATCAGATTAACTATAATCAAAGGATTAGCAAATGCATTGTCTTACCTGCACCATGACTGCACACCCAGTATTGTTCATAGAGACATATCAGGAAACAATGTCTTATTGGATGATGAGTTTGAGCCTAAGATTTGTGACTTTGGAGTAGCTAGGTTACTCACAGATGGGGAAGCTACATTGACAGCTCCAGTTGGTTCATATGGCTATACAGCACCAGAGCTTGCTTTTACAATGAAAGTGACAGAGAAATGTGACGTGTATAGTTTCGGAATTGTGGCATTGCAATTATTGGCCGGAAAATATCCTCACGAGCTCCTTTCATGCTTAGAGTCTAGAAATTTTGATAAGCAGCTAATAGATGTGTTGGATACCAGGATTGATTCTCCAGCTGGTTCTACTGTGCAGCTTCTGGTTTTGGTAGCAAGCCTTGCTCTTAAATGCATTGATAAAGATCCGAAGTGTCGACCCACCATGCAACAAGTGTCCGGTGAAGTGTTATCCTATGCAAGATGGTCAATTACTGCCCCTCTCAACTTTATCACATTGCAGAATTTACTGGACATGTAG 3621 0.3991 MKKVFQLTLLSLILLAILADFSSQKEAEALINWMNSLNSNSSLLSWNLSNTSSSTPCKWTGITCGEDGSVIEINLPSSGLDGTLSRFDFSAFPNLTSLNLNLNNLVGEIPSGIGNATKLKMLDLSSNNFTNPIPSEIGNLLDLQVLRLYNNSLLKQMPFQLSNLQKLWLLDVGANYLENPDPAQFKGMASITELWLTYNFFTEVPLFVFRCPKLMFLDLSNNIITGQIPMHSFVSLKNLTYLNLTNNQFEGLIPSEIQNLLNLKHLKLGQNKLNGTIPEEIGFLSNLEELELHENLFHGPIPSSIKNLRKLESLNLKNAGLNSSIPDEIGSCISLTYIDMSGNNLTGALPLSMASLTKIRELGISDNHLSGELHPFLLSNWSKLISLQLQMNDLSGTLSPEVGSLHNLTLLFLYQNKFSGLIPLEIGNLLNLENLELSNNFFNGSIPPTIGKLHKLTTLGLASNQLSGVIPSEIGDMESIEVLDLSENKLAGTLPSSITQLANINLLYLSFNNFSGSIPEDFGPILLRNLSFAGNRFSGKLPPGICKGGNLIYLAASENNLEGPIPDSLRNCTKLNRVLLGKNFLSGDITNAFGIYPDLDFIDLGDNQLSGMLSRNWGECKNLGSFSIAVNRVKGNIPPEFGKLPKLQTLDLSDNNLTGNIPLELLSSSSILLKLNLSNNKLSGQVPAEIGELSRLQFLDLSANNLSGPIPKRLGNCQALISLKLAMNKLDGHIPNELGNLVSLQPLLDLSYNSLSGEMIPELGKLTALEVLNLSHNQLSGTIPSALEQLVSLQLVDLSYNKLEGPIVDQEAFLKAPAEALVGNALCGENAYLSPCNGHTLSENHKKNRRWKLMISIFIPLAALIILLVFLGIFIFHRYYKVDQDDKSVSEYNSFFTWNHWKKVEFKDIRIATENFSDKYCIGEGGQGSVYKAVLPSGEIFAVKRLHQDEEMKLSKSQMKNFMSEIQALTNIRHRNIVKMCGFSRLDRSMFFTYEFVERGSLEKLLQDDEKAKILTWDIRLTIIKGLANALSYLHHDCTPSIVHRDISGNNVLLDDEFEPKICDFGVARLLTDGEATLTAPVGSYGYTAPELAFTMKVTEKCDVYSFGIVALQLLAGKYPHELLSCLESRNFDKQLIDVLDTRIDSPAGSTVQLLVLVASLALKCIDKDPKCRPTMQQVSGEVLSYARWSITAPLNFITLQNLLDM 1206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3385 1206 SUPERFAMILY RNI-like 72 395 - -
Sto13g3385 1206 Gene3D Ribonuclease Inhibitor 499 839 IPR032675 -
Sto13g3385 1206 Pfam Protein kinase domain 919 1179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3385 1206 ProSiteProfiles Leucine-rich repeat profile. 646 667 IPR001611 GO:0005515
Sto13g3385 1206 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1042 1054 IPR008266 GO:0004672|GO:0006468
Sto13g3385 1206 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Sto13g3385 1206 SUPERFAMILY L domain-like 527 805 - -
Sto13g3385 1206 PANTHER - 11 1204 - -
Sto13g3385 1206 SUPERFAMILY Protein kinase-like (PK-like) 890 1179 IPR011009 -
Sto13g3385 1206 Gene3D Transferase(Phosphotransferase) domain 1 997 1190 - -
Sto13g3385 1206 Gene3D Ribonuclease Inhibitor 22 183 IPR032675 -
Sto13g3385 1206 Gene3D Ribonuclease Inhibitor 377 497 IPR032675 -
Sto13g3385 1206 Gene3D Ribonuclease Inhibitor 280 376 IPR032675 -
Sto13g3385 1206 SUPERFAMILY L domain-like 381 566 - -
Sto13g3385 1206 ProSiteProfiles Protein kinase domain profile. 916 1184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3385 1206 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 11 1204 - -
Sto13g3385 1206 Gene3D Phosphorylase Kinase; domain 1 879 996 - -
Sto13g3385 1206 Pfam Leucine rich repeat 645 706 IPR001611 GO:0005515
Sto13g3385 1206 Pfam Leucine rich repeat 765 803 IPR001611 GO:0005515
Sto13g3385 1206 Pfam Leucine rich repeat 191 249 IPR001611 GO:0005515
Sto13g3385 1206 Pfam Leucine rich repeat 455 514 IPR001611 GO:0005515
Sto13g3385 1206 SMART LRR_sd22_2 766 789 - -
Sto13g3385 1206 SMART LRR_sd22_2 284 310 - -
Sto13g3385 1206 SMART LRR_sd22_2 260 283 - -
Sto13g3385 1206 SMART LRR_sd22_2 693 719 - -
Sto13g3385 1206 SMART LRR_sd22_2 453 485 - -
Sto13g3385 1206 SMART LRR_sd22_2 644 665 - -
Sto13g3385 1206 SMART LRR_sd22_2 405 426 - -
Sto13g3385 1206 SMART LRR_typ_2 260 284 IPR003591 -
Sto13g3385 1206 SMART LRR_typ_2 188 211 IPR003591 -
Sto13g3385 1206 SMART LRR_typ_2 356 380 IPR003591 -
Sto13g3385 1206 SMART LRR_typ_2 693 717 IPR003591 -
Sto13g3385 1206 SMART LRR_typ_2 790 815 IPR003591 -
Sto13g3385 1206 SMART LRR_typ_2 766 789 IPR003591 -
Sto13g3385 1206 SMART LRR_typ_2 477 501 IPR003591 -
Sto13g3385 1206 SMART LRR_typ_2 405 428 IPR003591 -
Sto13g3385 1206 SMART LRR_typ_2 236 259 IPR003591 -
Sto13g3385 1206 SMART LRR_typ_2 308 332 IPR003591 -
Sto13g3385 1206 SMART LRR_typ_2 140 164 IPR003591 -
Sto13g3385 1206 SMART LRR_typ_2 644 668 IPR003591 -
Sto13g3385 1206 SMART LRR_typ_2 429 453 IPR003591 -
Sto13g3385 1206 SMART LRR_typ_2 92 116 IPR003591 -
Sto13g3385 1206 PRINTS Leucine-rich repeat signature 647 660 - -
Sto13g3385 1206 PRINTS Leucine-rich repeat signature 766 779 - -
Sto13g3385 1206 Gene3D Ribonuclease Inhibitor 184 279 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3385 Sto-Chr13 37122198 37125909 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3385 7 662 Receptor kinase-like Gene Family AT4G08850 32.958 3.32e-79 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto13g3385 Pkinase 2.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3385 - - ccaj:109803789 1519.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3385 13 37122198 37125909 Sto13g3385 13 37122198 37125909 ECH