Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3384 ATGACAACCTTTCACAAAACTCCTGCTCTCCTCTTTTTCATACTTTTGCTATGTTTTCTTCCTTTGAAGATAAATGCATCACCAAGAACAGAAGCAGAAGCTCTTGTCCAATGGAAAAACAGTTTTTCTCCTTCACTTCCTTCTTCTCTCAACTCCTGGTCCCTCACAAACGTAGACAACCTTTGCAACTGGGGTGCCATTGTTTGTGACATCACTAATACAACAGTCTCACAGATAAACATCTCTGGTGCCAATCTCACTGGAACACTCACTGGGTTGGATTTTGCTTCCCTCCCCAATCTCACCCACCTCAATCTCAATAACAATAATTTCGGTGGGTCAATACCATCCGCAATTGGTAACCTCTCCAAGCTCACTTTCTTGGATTTGGGGAACAACCTCTTCGACGGGGCACTACCTTCTGAGCTAGGACTACTGAAGGAACTTCAATATCTGAGTGTTTACAACAACAACCTTACCGGTGTCATTCCCTATCAGCTCATGAATCTCCTGAAGGTATGGTACCTAGACTTCGGATCAAACTACTTTGTTAATCCTCGTGATTGGTCCCAATACTCAAGCATGTCTTCCTTGACCCTTACCCACCTCAGTTTGGCTCTCAATAGTTTCACTTCTGAATTTCCAAGTTTCATTCTGCAGTGTCAAAACTTGACATTTCTTGACCTATCTAACAATCCTATCACTGGCTTAATACCAGAACTGGTGTATACCAATCTGGGCAAGCTTGAATACCTCAATCTAACCAGTTGTGGGCTAGAAGGACAATTGTCATCAAACTTGTCCGAGCTTTCTAATCTCAAAGAAATTCATTTGGGCCTTAACAATTTTACTGGTCCAATTCCCACGAACATAGGATTGTTATCTGGACTTCAGATTCTTGAATTGAATGAAAATTCATTCCAAGGCGGAATTCCCTCCTCTCTAGGCCAGCTCAAAGAGTTACGGTATCTTGATCTCCATAAAAATTCCTTAAATTCTACAATTCCCTCTGAGCTTGGCCTGTGTACTAATTTAACCTTCCTGGCTTTGGCAGAAAATAGACTGACTGGTTCCTTGCCTTTGACATTGTCAAATCTGACCAAAATCACAAATTTGGGTTTGTCAGATAATTTCTTTTCTGGTGAAATTTCTGCTTCGTTAATCTCTAATTGGATTGAGTTGATTTCTCTACAACTTCAAAACAATTCATTCAATGGAAAAATTCCTGCAGCGATCGGCATGTTTAAGAAGATCAATTATCTCTATCTGTACAACAATAATTTCTCTGGTCCTATTCCTCCCGAGATAGGAAACTTGAAAGAAATGATACAACTAGATTTTTCATCAAACCAATTCTCTGGTTCGATTCCTCCAACTGTAGGGAGTCTTAGAAATATTTTAGTAATAAATCTTGCCTTCAATAATCTCACAGGAACAGTTCCCGTTGAAATTGGAAACCTCACTTCACTACAAACTTTTGATGTCAACAATAATCTTTTACATGGAGAATTGCCAGACACCATATCCCGGCTAATTGAGTTACAGACACTTTCTGTGTTCACCAATAAACTTTCCGGTGGCATTCCCAAAGATTTTGGGAAGTACAGCCCTAATTTGAATAAAGTCTTCCTTTCAAACAACAGCTTCTCCGGAGAACTGCCTCCTGACTTGTGCAGTGGTTTTGCGCTTGTAGACTTGATGGTGAATAACAACAGTTTTTCAGGGCCACTGCCAAAGTGCTTGAGAAATAGTTCAGCACTATACAGGGTGAAGCTTGAAAGAAATCACTTCTCCGGAAACATCACAGAAGCGTTTGGGTTCCACCCACATCTTACTTCTATCACACTTAGCGACAATCAGTTTGTTGGTGAACTATCTCCAGAGTGGAGTGAAATGGTAAACTTAACCAGATTGGAGATGGGTAACAATAAACTTTCTGGGAAAATTCCACCTGAGCTGGGTAAGTTAAGCCAATTACAATACCTAAGTCTGCACTCCAATGAATTCACTGGCAGCATCCCAACTGAAATGGCAAATCTAAACAAGCTTTACTTGTTCAATTTGAGCAATAACCATTTGACAGGAGAAATACCCAAGAGTATTGGTAAAATGGCTCAGCTTGATTATCTTGATTTATCACAAAACAACTTCACCGGAAGCATACCAAAAGAGCTCGGTAATTGTGACAATTTAATGAGCTTGAATTTAAGCCATAACCAATTATCTGGGGAGATACCACCGGAACTTGGCAATCTGTTCTCACTCCAGTACTTCTTAGACCTCAGCAGCAACTCTCTCTCAGGGCCAATTTCGCAAAATCTTGGAAAGCTCATTCATTTGCAGATTCTCAATGTCTCACACAACCATCTTTCAGGAAAAATCCCACAGTCGTTTACAAGTATGGTTAGCCTTCAATACATCGATTTTTCTTACAACAACTTGACTGGTCCAATCCCAACTGGTGGTAATGGTATTTTCCAACAAGCAGCTGCTGAAACTTATGTTGGAAACTCTGGTTTGTGTGGCAAGGCAAACGGATTAATTGCCTGCTCCACAGAATCTTCCACAGACGAATCTGGAGGGACTAACAAAAAGGTTCTTCTAGGTGTTATTATACCAGTTTGTGGGCTATTAATTATAGGGTTGATTGTTGTTGGAATTCTAATGCTCCGTCCACGGACCAAACTTGTTGACCAAGAGATCAGAGATGCTCCAGAGAAGGAAAAAATTGTAAGCACAGTGTGGggaagaaatgaaaaattaaaatttgctgAAATTGTTAAAGCCACAGATGACTTCAATGACATGTACTGCATTGGAAAAGGGGGTTTCGGAAGAGTTTACAGAGCAGAATTATCCACAGGTCTAGTTGTTGCTGTCAAAAGACTCAATATCTCAGACTCTAGCGACATTCCAGCTGAGAGTTTCCAGAGTTTTGAGAATGAGATAAGAACACTTACAGAAGTGAAGCACCGTAACATCATAAAGCTTTACGGGTTCTGTTCCAGCAGGGGACGCTTGTACCTGATTTACGAATATGCAGAGAGTGGCAGCTTGGGGAAAGTACTGTATGGAGAGGAAATGAAAACGATACTTAGCTGGACTGCGAGACTGAAAATTGTGCAAGGCATAGCTGAAGCAATTGCATACCTTCACAGTGGCTGTTCCCCACCAGTTGTGCACCGAGATGTGACGTTGAATAATATATTGCTGGACTCAGAATTTGAACCCCGTCTCGCGGATTTTGGCGTATCAAAGCTTCTAAGCCCTAATTCAACAAGCTGGACCTCAATCGCTGGCTCCTATGGCTACATGGCTCCAGAACTAGCACAAAGCATGAGAGTGACGGAGAAGTGCGATGTTTTTAGTTTTGGAGTGGTGGCTTTGGAGATGATGTTGGGAAAGCATCCTGGAGATTTCTTGGCTACATTTTCGTCAATGGAGAATCAACATTTGCTGTTGAAGGATGTGATAGACCAGAGACTTGTTCCTCCGACGGGTGAGTTGGCTGAAGCAATAGCGTTCGTAATGGCCATTGGGTTGGCGTGCACGCGTACCGACCCTATGTCCAGACCCACCATGCGTTCCGTGGCGCGAGAACTATCAGCTAACGCCCAAGCTTGCCTCTCTGAATCATTTCGCACCATATCAATAGGGAAGCTAACATCCTATAACTGA 3678 0.416 MTTFHKTPALLFFILLLCFLPLKINASPRTEAEALVQWKNSFSPSLPSSLNSWSLTNVDNLCNWGAIVCDITNTTVSQINISGANLTGTLTGLDFASLPNLTHLNLNNNNFGGSIPSAIGNLSKLTFLDLGNNLFDGALPSELGLLKELQYLSVYNNNLTGVIPYQLMNLLKVWYLDFGSNYFVNPRDWSQYSSMSSLTLTHLSLALNSFTSEFPSFILQCQNLTFLDLSNNPITGLIPELVYTNLGKLEYLNLTSCGLEGQLSSNLSELSNLKEIHLGLNNFTGPIPTNIGLLSGLQILELNENSFQGGIPSSLGQLKELRYLDLHKNSLNSTIPSELGLCTNLTFLALAENRLTGSLPLTLSNLTKITNLGLSDNFFSGEISASLISNWIELISLQLQNNSFNGKIPAAIGMFKKINYLYLYNNNFSGPIPPEIGNLKEMIQLDFSSNQFSGSIPPTVGSLRNILVINLAFNNLTGTVPVEIGNLTSLQTFDVNNNLLHGELPDTISRLIELQTLSVFTNKLSGGIPKDFGKYSPNLNKVFLSNNSFSGELPPDLCSGFALVDLMVNNNSFSGPLPKCLRNSSALYRVKLERNHFSGNITEAFGFHPHLTSITLSDNQFVGELSPEWSEMVNLTRLEMGNNKLSGKIPPELGKLSQLQYLSLHSNEFTGSIPTEMANLNKLYLFNLSNNHLTGEIPKSIGKMAQLDYLDLSQNNFTGSIPKELGNCDNLMSLNLSHNQLSGEIPPELGNLFSLQYFLDLSSNSLSGPISQNLGKLIHLQILNVSHNHLSGKIPQSFTSMVSLQYIDFSYNNLTGPIPTGGNGIFQQAAAETYVGNSGLCGKANGLIACSTESSTDESGGTNKKVLLGVIIPVCGLLIIGLIVVGILMLRPRTKLVDQEIRDAPEKEKIVSTVWGRNEKLKFAEIVKATDDFNDMYCIGKGGFGRVYRAELSTGLVVAVKRLNISDSSDIPAESFQSFENEIRTLTEVKHRNIIKLYGFCSSRGRLYLIYEYAESGSLGKVLYGEEMKTILSWTARLKIVQGIAEAIAYLHSGCSPPVVHRDVTLNNILLDSEFEPRLADFGVSKLLSPNSTSWTSIAGSYGYMAPELAQSMRVTEKCDVFSFGVVALEMMLGKHPGDFLATFSSMENQHLLLKDVIDQRLVPPTGELAEAIAFVMAIGLACTRTDPMSRPTMRSVARELSANAQACLSESFRTISIGKLTSYN 1225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3384 1225 ProSitePatterns Protein kinases ATP-binding region signature. 939 961 IPR017441 GO:0005524
Sto13g3384 1225 SMART LRR_typ_2 122 146 IPR003591 -
Sto13g3384 1225 SMART LRR_typ_2 270 294 IPR003591 -
Sto13g3384 1225 SMART LRR_typ_2 632 656 IPR003591 -
Sto13g3384 1225 SMART LRR_typ_2 730 752 IPR003591 -
Sto13g3384 1225 SMART LRR_typ_2 777 800 IPR003591 -
Sto13g3384 1225 SMART LRR_typ_2 487 511 IPR003591 -
Sto13g3384 1225 SMART LRR_typ_2 537 560 IPR003591 -
Sto13g3384 1225 SMART LRR_typ_2 439 463 IPR003591 -
Sto13g3384 1225 SMART LRR_typ_2 704 728 IPR003591 -
Sto13g3384 1225 SMART LRR_typ_2 318 342 IPR003591 -
Sto13g3384 1225 SMART LRR_typ_2 221 244 IPR003591 -
Sto13g3384 1225 SMART LRR_typ_2 801 828 IPR003591 -
Sto13g3384 1225 SMART LRR_typ_2 98 121 IPR003591 -
Sto13g3384 1225 Pfam Protein kinase domain 936 1198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3384 1225 Gene3D Ribonuclease Inhibitor 194 288 IPR032675 -
Sto13g3384 1225 Gene3D Transferase(Phosphotransferase) domain 1 1015 1215 - -
Sto13g3384 1225 Gene3D Ribonuclease Inhibitor 289 389 IPR032675 -
Sto13g3384 1225 Gene3D Ribonuclease Inhibitor 390 506 IPR032675 -
Sto13g3384 1225 ProSiteProfiles Leucine-rich repeat profile. 223 244 IPR001611 GO:0005515
Sto13g3384 1225 SUPERFAMILY L domain-like 44 388 - -
Sto13g3384 1225 Gene3D Phosphorylase Kinase; domain 1 895 1013 - -
Sto13g3384 1225 Gene3D Ribonuclease Inhibitor 29 193 IPR032675 -
Sto13g3384 1225 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 412 1202 - -
Sto13g3384 1225 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 199 387 - -
Sto13g3384 1225 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 297 419 - -
Sto13g3384 1225 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 29 176 - -
Sto13g3384 1225 Gene3D Ribonuclease Inhibitor 507 852 IPR032675 -
Sto13g3384 1225 ProSiteProfiles Leucine-rich repeat profile. 730 752 IPR001611 GO:0005515
Sto13g3384 1225 SUPERFAMILY L domain-like 386 628 - -
Sto13g3384 1225 ProSiteProfiles Protein kinase domain profile. 933 1209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3384 1225 CDD STKc_IRAK 939 1201 - -
Sto13g3384 1225 Pfam Leucine rich repeat 759 814 IPR001611 GO:0005515
Sto13g3384 1225 Pfam Leucine rich repeat 609 668 IPR001611 GO:0005515
Sto13g3384 1225 Pfam Leucine rich repeat 682 741 IPR001611 GO:0005515
Sto13g3384 1225 SUPERFAMILY Protein kinase-like (PK-like) 917 1201 IPR011009 -
Sto13g3384 1225 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1059 1071 IPR008266 GO:0004672|GO:0006468
Sto13g3384 1225 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 297 419 - -
Sto13g3384 1225 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 199 387 - -
Sto13g3384 1225 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 412 1202 - -
Sto13g3384 1225 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 29 176 - -
Sto13g3384 1225 SUPERFAMILY L domain-like 592 842 - -
Sto13g3384 1225 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Sto13g3384 1225 Pfam Leucine Rich Repeat 100 122 IPR001611 GO:0005515
Sto13g3384 1225 Pfam Leucine Rich Repeat 223 240 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3384 Sto-Chr13 37115502 37119252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3384 10 650 Receptor kinase-like Gene Family AT4G08850 33.533 9.17e-84 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto13g3384 Pkinase 2.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3384 - - gmx:100809137 1555.42