Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3380 ATGTCACTGGGTCTACCGGTGGCAGCGACGGTGAACTGTGCTGATAACACCGGAGCTAAGAATCTTTACATCATTTCGGTGAAGGGAATCAAGGGTCGCCTTAACCGTTTGCCTTCGGCTTGCGTCGGGGACATGCGCAAGCCATGGCGCCGAAAGGACGGTGTTTACATGTACTTCGAAGATAATGCTGGTGTCATTGTGAATCCCAAAGGTGAAATGAaagGTTCTGCCATCACCGGTCCAATAGGCAAGGAGTGTGCAGATTTGTGGCCAAGGATTGCAAGTGCAGCCAATGCTATCGTTTGA 306 0.5033 MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3380 101 SUPERFAMILY Ribosomal protein L14 3 101 IPR036853 GO:0003735|GO:0005840|GO:0006412
Sto13g3380 101 PANTHER - 46 101 - -
Sto13g3380 101 PANTHER - 1 45 - -
Sto13g3380 101 Pfam Ribosomal protein L14p/L23e 40 101 IPR000218 GO:0003735|GO:0005840|GO:0006412
Sto13g3380 101 Pfam Ribosomal protein L14p/L23e 7 45 IPR000218 GO:0003735|GO:0005840|GO:0006412
Sto13g3380 101 Gene3D Ribosomal protein L14 1 45 IPR036853 GO:0003735|GO:0005840|GO:0006412
Sto13g3380 101 Gene3D Ribosomal protein L14 46 101 IPR036853 GO:0003735|GO:0005840|GO:0006412
Sto13g3380 101 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 46 101 IPR000218 GO:0003735|GO:0005840|GO:0006412
Sto13g3380 101 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 45 IPR000218 GO:0003735|GO:0005840|GO:0006412
Sto13g3380 101 SMART Ribosomal_L14_2 4 101 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3380 Sto-Chr13 37092360 37093981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3380 1 101 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 80.000 7.31e-66 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3380 K02894 - mus:103980731 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0750 8 4726243 4727798 Sto13g3380 13 37092360 37093981 CCT
Sto13g3380 13 37092360 37093981 Sto13g3380 13 37092360 37093981 ECH