Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3359 ATGGCTACTTCTCTCACTTGCTCCCCCACTCACCTCCAATCACTTCTTGCTAATACCACCGATTCTTCAGCCGCCGCTGAATACATCTGTGGCCAATTCGAAGCTGTTTCTAACAAATTTATTGATACCAGTTATGCTGTTGATAATACCTACCTTCTCTTCTCTGCCTACCTTGTCTTTGCAATGCAGCTAGGCTTCGCTATGCTCTGTGCTGGCTCTGTGCGAGCCAAGAACACCATGAACATCATGCTCACTAATGTTCTCGACGCTGCGACTGGTGGCATTTTCTATTACCTTTTCGGATTCGCTTTCTCTTATGGTTCCCCCTCCAATGGCTTCATTGGGTCTCACTTCTTCGGCCTCGAGAAATTCCCAGCACCGAGTTTCGATTACGGCTATTTTCTTTACCAATGGGCGTTTGCCATTGCCGCCGCCGGAATCACCAGTGGCTCCATCGCAGAGAGAACCCAATTCGTCGCCTATTTGATCTACTCATCGTTCCTCACGGGTTTGGTTTACCCCATTGTCTCTCACTGGTTCTGGTCCTCCGATGGTTGGGGTAGCGCCTCTCGCTCCGAGAATCTCTTGTTCGGATCTGGGGTCATCGATTTCGCCGGCTCCGGCGTGGTCCACTTGGTCGGCGCCGTCGCCGGCTTCTGGGGTGCCTTCATCGAGGGTCCTCGTGTAGGCAGATTCGACCACGAAGGGAAACCCGTGGCCATGAGAGGACACAGTGGGACGTTGGTTGTTTTGGGGACGTTCTTATTGTGGTTCGGATGGTACGGATTCAACCCTGGTTCCTTCATCACCATCTTGAAGACCTACAATGGAACCAGTGGTTCGTACTACGGGCAATGGAGTGCGGTGGGTCGAACCGCCGTGACCACCACGCTTGCTGGTTGCTCTGCAGCACTGACCACACTCTTCAGCAAGCGACTCCTCAGTGGGCATTGGAACGTCACTGACGTCTGCAATGGTTTGCTTGGTGGGTTCGCCGCCGTAACCTCTGGGTGCGCCGTGGTGGACCCATGGGCTGCGATCCTATGTGGGTTCGTGGCGGCGTGGGTGCTGATTGGATGCAACATTTTAGCAGAGAGATTCAGGTACGACGACCCATTGGAGGCAGCACAGCTTCATGGAGGGTGCGGGTCGTGGGGGATAATCTTTACAGCTCTGTTTGCGAAGAAGGAGTATGTGAATGAGGTGTATCCAGGTGTGGCTAATAGGCCGTACGGGTTGGTTATGGGAGGAGGTGGGAAGCTATTGGCTGCACATGTTGTGCAGATTCTGGTGATTTCGGGTTGGGTGAGTGTTACTATGGGGATTGTGTTCTTAGTGTTGCATAAATTGAAGCTACTGAGGATTTCTCCTGAAGAAGAAATGGCTGGATTGGATGTGACTAGTCATGGCGGATTGGCGTATGTGTATCATGAGGAGCTTGAGCTTCCGCAGAAACATGCATTTGGGATGAGGACGGATGCTTCGGCTGTATAA 1494 0.5234 MATSLTCSPTHLQSLLANTTDSSAAAEYICGQFEAVSNKFIDTSYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGIFYYLFGFAFSYGSPSNGFIGSHFFGLEKFPAPSFDYGYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGLVYPIVSHWFWSSDGWGSASRSENLLFGSGVIDFAGSGVVHLVGAVAGFWGAFIEGPRVGRFDHEGKPVAMRGHSGTLVVLGTFLLWFGWYGFNPGSFITILKTYNGTSGSYYGQWSAVGRTAVTTTLAGCSAALTTLFSKRLLSGHWNVTDVCNGLLGGFAAVTSGCAVVDPWAAILCGFVAAWVLIGCNILAERFRYDDPLEAAQLHGGCGSWGIIFTALFAKKEYVNEVYPGVANRPYGLVMGGGGKLLAAHVVQILVISGWVSVTMGIVFLVLHKLKLLRISPEEEMAGLDVTSHGGLAYVYHEELELPQKHAFGMRTDASAV 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3359 497 SUPERFAMILY Ammonium transporter 45 455 - -
Sto13g3359 497 PANTHER AMMONIUM TRANSPORTER 4 488 - -
Sto13g3359 497 TIGRFAM amt: ammonium transporter 48 474 IPR001905 GO:0008519|GO:0016020|GO:0072488
Sto13g3359 497 Pfam Ammonium Transporter Family 51 474 IPR024041 GO:0008519|GO:0016020|GO:0072488
Sto13g3359 497 PANTHER AMMONIUM TRANSPORTER 4 488 - -
Sto13g3359 497 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Sto13g3359 497 Gene3D Ammonium transporter AmtB like domains 28 491 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3359 Sto-Chr13 36971005 36972498 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3359 1 479 Inorganic Solute Cotransporters AT4G28700 77.847 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3359 K03320 - cit:102629580 843.188