Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3356 ATGACATATCACTCTACTGCCTCCCAATGCTACCGCGCTGAGGTTAATTGCAGGCGACTACTGTTTTGCCGGAATTTTGCAAGTTACTGCGAGCTCCGAGGTATTCACTTCTTCTTGTCCTTCATATGCCGCTGCTTGTATGAGGAAACTATGAATGCCGAGTATGTAGCTTTCTTTCAGCTTGGAAATGTTCAGCTGGGGGCAAGTTATTTCTCTTTGTCAACATTCAAGTCTCCGTCTCCAATGCCATACCAGCCTTTGTCTATTAGAGAAATTTTAGTTAAGCATGTGAAGTTAGTTTCTATTAGTGTGTCATCTACTTCATCAAAACCAATTAAAACTTGGTTAGTTGATCCTTCTCTAGGACCATCTTCAGCACCTACGCCATCTCCATCTAGCCAAGGTCCTGGTGTGAATCCAAAACCAAGACatcatcgtcgtcgtcgtcatcaCCATAGTGTGAGACCTCATGCAGTAGCTCCATCTCCTTCTAAAGATCAAGGTTGTGACCAAATCTGTATGGAGCCACTCACAGGAACTCCCTTTGGTTCTCCTTGTGGATGTGTATTTCCCATGAAAGTCAGACTAATATTGGATGTAGCTCCTTATGCTGTTTTTCCAGTAATGAATGAGTTAGAGATTGAGATTGCATCAGGCACATATTTGGAACAGAGCCAGGTGAAGATAATGGGTGCAAATGCTGACAGTCAAAATCAGGGAAGAACTGTAGTTGATATCAACTTGGTTCCGCTGGGAGAGAAGTTTGACAACACAACTGCAGTTCTGATATATGAGAGGTTTTGGCATAAGAAAATTCCTTTAAATGGGAGCCTTTTTGGCGATTATGTAGTCATGTACATTAATTATTCAGGTATTCCATCATCTCCACCATATGGAGGTTACATTGGGAGTGGTCCCAGTGCAAGTGCCAGTAATCTTCCAATCACTGCGAACTTTGTCAACAAGAACCAGAAAATGAATCTCAGAACCATAATCATCATTGCTTTATCTGCCTTTGTACTCTTGTTGGTCTTTGTTGGAGCATTTTCCATCTTTTTGAAATGGCGGAAGATTAGGAGGCCATCAAGTGCTGTTGGTCCTGCATTTACATCATCTATAAATAAGAGATCTGGCATGGGGTCCATGTTGTCAAGCAGTATTACAAGCTCAACATCAGTGTCCCTTATGTCCACTATGGCTACTTCTATTCTCTCTGTCAGAACATTTTCACTTTCTGAGCTTGAGAAAGCAACAGATAAGTTCAGTTCAAAGAGAGTAGTAGGAGAGGGGGGATTTGGACGTGTTTATAGTGGGACATTGGAAGATGGAACTGAAATTGCAGTTAAGCTCCTAACAAGAGATCATCAGAATGGAGACCGTGAATttattgcagaagttgagatgCTAAGCCGATTGCATCATCGTAATCTTGTGAAACTAATTGGTATATGCATTGAAGGGCGCAGACGTTGCTTGGTGTATGAGCTAGTTCACAATGGCAGTGTTGAGTCCCATTTGCATGGTGTTGACAAGAAGAAGGGACCTCTGGATTGGGAAGCAAGGATGAAAGTTGCTCTTGGAGCTGCAAGAGGATTGGCCTATCTTCATGAGGATTCTAATCCTCGTGTTATTCATCGAGATTTTAAAGCTAGTAATGTTTTACTAGAAGATGATTTTACCCCCAAGGTTTCTGATTTTGGTTTGGCAAGAGAAGCAACTGAAGGAAGCCATCATATATCTACACGTGTCATGGGAACTTTTGGGTATGTGGCCCCAGAATATGCAATGACAGGCCATTTACTTGTTAAAAGTGATGTTTATAGCTATGGTGTAGTGCTGCTTGAACTCCTGACCGGCAGAAAACCTGTGGACATGTCTCAACCTCCTGGACAGGAGAATCTAGTAACATGGGCACGGCCACTCTTGACGAGTAGAGAAGGTTTACAACAGCTAGTGGATCCATCTTTGGCTGGAGGTTATGACTTTGATGACATGGCAAAGGTGGCTGCCATTGCTTCCATGTGTGTCCACCCCGAGGTCACTCACAGACCTTTCATGGGTGAAGTTGTGCAGGCTCTAAAGCTGATATACAACGACACAGATGAGACTTGTGGGGATTGCTGTAGCCATAAGGAATCTTCTGCTCAGGAGTCTGATATTAGAGGTGATCTTGCACCTTCTGATAGCAGTTGGTGGAATGCCGGAGGGATAACCCCGCGGTTAAATTACGGTCAAGCATCTTCCTTCATCACCATGGAATACAGTTCTGGTCCACTTGAAGAAATGGAAAACAGACCGTTTTCAGCTTCAAGCTTGATTGGGGATGAGATATCTTTACCGATTAGGCATGGGAATAGATCAGGTCCCCTAAGAACAGTCCGAAGCAAGCTATCATTGTATAGATTTACTGGGAGTCGGAGTGAACATGGGGGACATCCTTCTAAGCGTGGTTTGAGTGATggttattgggcttaa 2475 0.4234 MTYHSTASQCYRAEVNCRRLLFCRNFASYCELRGIHFFLSFICRCLYEETMNAEYVAFFQLGNVQLGASYFSLSTFKSPSPMPYQPLSIREILVKHVKLVSISVSSTSSKPIKTWLVDPSLGPSSAPTPSPSSQGPGVNPKPRHHRRRRHHHSVRPHAVAPSPSKDQGCDQICMEPLTGTPFGSPCGCVFPMKVRLILDVAPYAVFPVMNELEIEIASGTYLEQSQVKIMGANADSQNQGRTVVDINLVPLGEKFDNTTAVLIYERFWHKKIPLNGSLFGDYVVMYINYSGIPSSPPYGGYIGSGPSASASNLPITANFVNKNQKMNLRTIIIIALSAFVLLLVFVGAFSIFLKWRKIRRPSSAVGPAFTSSINKRSGMGSMLSSSITSSTSVSLMSTMATSILSVRTFSLSELEKATDKFSSKRVVGEGGFGRVYSGTLEDGTEIAVKLLTRDHQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRRRCLVYELVHNGSVESHLHGVDKKKGPLDWEARMKVALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSHHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVTWARPLLTSREGLQQLVDPSLAGGYDFDDMAKVAAIASMCVHPEVTHRPFMGEVVQALKLIYNDTDETCGDCCSHKESSAQESDIRGDLAPSDSSWWNAGGITPRLNYGQASSFITMEYSSGPLEEMENRPFSASSLIGDEISLPIRHGNRSGPLRTVRSKLSLYRFTGSRSEHGGHPSKRGLSDGYWA 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3356 824 Gene3D Transferase(Phosphotransferase) domain 1 497 717 - -
Sto13g3356 824 Pfam Protein tyrosine and serine/threonine kinase 424 692 IPR001245 GO:0004672|GO:0006468
Sto13g3356 824 PANTHER OS01G0750732 PROTEIN 92 817 - -
Sto13g3356 824 Gene3D Phosphorylase Kinase; domain 1 392 496 - -
Sto13g3356 824 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 92 817 - -
Sto13g3356 824 MobiDBLite consensus disorder prediction 121 169 - -
Sto13g3356 824 MobiDBLite consensus disorder prediction 140 156 - -
Sto13g3356 824 ProSitePatterns Serine/Threonine protein kinases active-site signature. 543 555 IPR008271 GO:0004672|GO:0006468
Sto13g3356 824 ProSitePatterns Protein kinases ATP-binding region signature. 427 449 IPR017441 GO:0005524
Sto13g3356 824 SUPERFAMILY Protein kinase-like (PK-like) 405 694 IPR011009 -
Sto13g3356 824 ProSiteProfiles Protein kinase domain profile. 421 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3356 824 MobiDBLite consensus disorder prediction 804 824 - -
Sto13g3356 824 CDD STKc_IRAK 427 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3356 Sto-Chr13 36944219 36950190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3356 172 702 Receptor kinase-like Gene Family AT5G56890 59.964 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Sto13g3356 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3356 - - gmx:100792309 1155.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0770 8 4844597 4851826 Sto13g3356 13 36944219 36950190 CCT
Sto13g3356 13 36944219 36950190 Sto13g3356 13 36944219 36950190 ECH