Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3351 ATGGAAGTTGCTGTAGCCAATCCTGTAGTTGGGTCCCATGTTTGGGTGGAGGATCCTGATGAAGCTTGGATAGATGGTGACGTTTTGGAGGTTAATGGAGAAGAAATCAAAGTCCTTTGCACTTCAGGGAAGACGGTGGTTGTTAAAACTTCCAGTATTCATCCTAAAGATACCGAGGTGCCACCATGTGGAGTAGACGATATGACAAAGCTTGCTTATCTGCATGAACCTGGAGTCCTGGATAATCTGAGATCAAGATATGATATCAGTGAAATTTATACTTACACCGGGAATATATTGATTGCTGTGAACCCTTTTACAAAGCTTCCTCATTTATATGATAGCCATATGATGGCACAATATAAAGGAGCAGCTTTTGGTGAGCTTAGTCCACATCCCTTTGCTGTTGCAGATGCTGCATATAGGCTTATGGTTAATGAGGGAATCAGCCAATCAATATTGGTCAGTGGGGAAAGTGGGGCTGGTAAAACAGAAAGCACTAAATTACTAATGCGTTATCTTGCTTACATGGGAGGGAGAGCTGCTGCTGAAGGTAGGAGTGTCGAGCAGAAAGTCCTGGAGTCAAATCCTGTTTTAGAAGCCTTTGGCAATGCAAAGACTGTTAGGAACAATAATTCAAGTCGTTTTGGTAAATTTGTGGAGATTCAATTTGACCAGATGGGGAGAATTTCAGGAGCTGCTATCAGAACTTATCTTCTGGAAAGATCACGTGTTTGCCAGTTGTCAGATCCAGAGAGGAATTATCACTGTTTCTACATGCTCTGTGCTGCACCACCTGAGGAAGTTCAGAAGTATAAATTGGGAAAGCCATCAACGTTTCattatctgaatcaaacaaattGCTATGAGTTAGAGGGGCTTGATGAATCTAAAGAATATATTGCAACAAGGAAAGCAATGGATGTCGTTGGAATAAGTTCTCAGGAGCAGGATGCAATATTTCGAGTAGTAGCTGCAATTTTGCATCTTGGAAACATTGAATTTGCCAAAGGGAAAGATATAGACTCATCTGTGCCGAAGGATGAAAAATCTCGGTTCCATCTAAAAACTGCTGCTGAGCTTTTCATGTGTGATGCAAAGGCACTTGAAGATTCTCTTTGCAAACGTGTTATTGTTACTCGTGATGAAACAATTATAAAAAGTTTGGATCCGGCAGCTGCTGTGCTCAGCCGAGATGCTTTGGCTAAAATTGTATACTCTAGGTTGTTTGACTGGTTGgtggaaaaaattaatagtTCAATTGGTCAAGATCCTGAATCAAAATCCTTAATTGGCGTGCTGGATATTTATGGTTTTGAGAGTTTCAAGAATAACAGATTTGTTGGGAGTTTTCTTCAAGTGACCATATTCCTTCAGATTCTAGAAGGAATTGGTGATCCCATTTTTGAGcaattttgtattaatttgacaAATGAAAAGCTTCAGCAACATTTTAATCAGCATGTCTTTAAAATGGAGCAAGAAGAATACAAAAAAGAAGAGATAGATTGGAGTTATATTGAATTTGTTGACAATCAAGATATTCTGGATCTCATTGAAAAGGTCACTTATCAAACTGAACTGTTCCTGGACAAGAACAAAGATTATGTTGTTGCAGAACATCAGGCACTTCTTAGTGCTTCCAAATGCCCCTTTGTATCTGGTTTGTTTCCCCCTTCACCTGAGGAATCATCCAAACAATCAAAGTTCTCATCAATAGGTTCCcgatttaagCAACAATTGCAATCACTACTTGAAACTCTCAGTGCCACTGAACCACACTACATTCGTTGTGTAAAACCCAATAATTTGCTTAAGCCAGCGAtctttgagaataaaaatgttttGCAACAATTGCGTTGTGGGGGAGTTATGGAGGCAATTAGAATAAGCTGTGCTGGATATCCCACTAGGAAAACTTTTGACGAATTTGTGGATAGATTTAGCCTTCTTGCACCTGAAGCTTTGGATGGAAGTCCTGATGAGATCACTGCTTGCAAGAGGATTCTTGAGAAGGTTGGACTTCAAGGCTACCAAATTGGTAAAACAAAGGTGTTTCTTCGAGCTGGTCAAATGGCAGATCTAGATACGCGTAGGAGTGAGGTCCTAGGAAAGTCAGCAAGCATAATTCAGAGGAAAGTGCGTTCCTATTTGGCACGCCGAAGTTTTGTCTTGCTTCGTTTGTCTGCTATACAGATTCAAGCTGCATGCAGAGGACAACTTGCTCGGCATGTTTATGAAGAAAAGCTGCGAGAGGCTTCTAGTCTGATGATTCAGCGGTGTTTCCGCATGCATATGGCTAGGAAGGCATACAAAGAATTATATGTCTCTGCCGTTTCTATTCAGACTGGTATGCGGGGTATGGCTGCTCGTTCTGAGCTACGCTTTAGGAAGCAGACTAGAGCAGCAATTGTTATCCAGAGCCATTGCCGGAAATACTTGGCACAACATCATTTTAAGGACTTAAAGAAAGCAGCAATTATAACACAGTGTGCATGGAGAGGAAAAGTTGCTCGCCGTGAATTACGAAAGCTCAAGATGGCTGCAAAGGAAACTGGAGCACTCCAAGCTGCCAAAAATAAGCTTGAAAAGCAAGTCGAGGACCTTACATTGAGATTGCAGCTGGAGAAACGATTGAGGGTTGACATTGAGGAAGCAAAAACACAAGAAAACTTAAGATTACAATCTGCTTTGCAAGATATGCAACTTCAGTTTAAAGAGGCTAAGGTACTGTTTGAAAAGGAGCGTGAAGCTGCAAAGAAGGCAGCAGAGAGAGCACCTGTCATACAGGAGGTTCCAGTTGTTGATAATGCATTGTTGGAGAAGCTCACTACTGAAAATGAGAAACTCAAGACCATGGTGAGTtcattggaaaagaaaattgatgaaactGAAAAAAGATACGAAGAGGCAAGCAAAATTAGTGAAGAAAGATTGAAGCAAGCCTTGGATGCAGAATCGAAGATAATCCAGTTGAAGACTACTATGCAAAGGCTTGAAGAGAAATTCTCAGACATTGAATCTGAAAACCAGATACTTCGGCAACAATCTTTGCTGAACTCAAATGTGAAAAAAATGTCAGAGCACCTCTCAACCCCAGCTGATGAGAAGTTGGAAAACGGTCATCATGTTGTGGAGGAACATAAAGCTGTTAGTACACCAATGAAAAAGTTTGGCACAGAATCTGATAGCAAATTAAGGAGATCATACATTGAACGCCAGCATGAAAATGTTGATGCGCTAATCAACTGTGTTAAAAACAATATTGGGTTCAGCCATGGAAAGCCTGTTGCTGCATTCACCATTTACAAATGTCTTCTCCACTGGAAATCATTCGAAGCTGAGAGGACAAGTGTATTTGATCGCCTCATCCAGATGATTGGTTCTGCAATTGAGAATCAAGATGACAATAATCTTATGGCTTATTGGCTGTCAAATACATCTGCGTTATTGTTTTTGCTCCAACAAAGTTTGAAATCTGGTGGTGCAACTGATGCAACTCCAGTCAAAAAGCCACCTAATCCAACTTCTCTCTTTGGAAGAATGACTATGGGTTTTCGGTCATCCCCTTCTTCTGCCAACCTTGCTGCCCCTGCATTGGAGGTTGTACGCAAGGTAGAGGCTAAATACCCTGCTTTGCTTTTTAAGCAGCAGCTTACAGCATATGTGGAGAAAATATATGGTATCATTCGAGACAACTTGAAGAAGGAGTTGACATCATTCCTTTCATTATGTATCCAGGCACCAAGAACATCAAAGGGAGTGTTACGATCTGGCCGATCATTTGGTAAAGATTCTCCATTGGGTCACTGGCAGAGTATTATTGAATCCCTCAACACCCTCCTCTGTACACTGAAAGAGAACTTTGTACCTCCTGTTCTCATCCAAAAGATCTATACTCAAACATTCTCATATATTAATGTACAACTCTTCAATAGtcTTCTCCTGCGCCGTGATTGTTGCACATTCACCAATGGGGAATATGTAAAAGCTGGATTGGCAGAATTGGAGTTATGGTGCTGCCAAGCAAAGGAGgagTATGCAGGGTCTTCTTGGGATGAGCTTAAGCACATAAGACAAGCCGTCGGATTCTTGGTTATTCATCAGAAGTATAGGATTTCCTATGATGAAATTACCAATGATTTGTGTCCTATCCTCAGTGTCCAGCAACTATATAGAATATGTACACTTTACTGGGATGCTAATTACAATACTCGAAGTGTGTCCCCAGACGTCCTTGCAAGCATGAAGGTGCTTATGGCTGAGGACTCCAATAATGCTGTCAGTGATTCTTTCTTATTGGATGATAATTCCAGTATCCCCTTCTCAGTGGATGACCTCTCTACATCGCTGCAAGAGAAGGACTTTTCCAACATGAAACTAGCAGATGAACTTCTTGAGAATCCAGCCTTCCAATTTTTAAAGGAGTAG 4431 0.4022 MEVAVANPVVGSHVWVEDPDEAWIDGDVLEVNGEEIKVLCTSGKTVVVKTSSIHPKDTEVPPCGVDDMTKLAYLHEPGVLDNLRSRYDISEIYTYTGNILIAVNPFTKLPHLYDSHMMAQYKGAAFGELSPHPFAVADAAYRLMVNEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRAAAEGRSVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQMGRISGAAIRTYLLERSRVCQLSDPERNYHCFYMLCAAPPEEVQKYKLGKPSTFHYLNQTNCYELEGLDESKEYIATRKAMDVVGISSQEQDAIFRVVAAILHLGNIEFAKGKDIDSSVPKDEKSRFHLKTAAELFMCDAKALEDSLCKRVIVTRDETIIKSLDPAAAVLSRDALAKIVYSRLFDWLVEKINSSIGQDPESKSLIGVLDIYGFESFKNNRFVGSFLQVTIFLQILEGIGDPIFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDILDLIEKVTYQTELFLDKNKDYVVAEHQALLSASKCPFVSGLFPPSPEESSKQSKFSSIGSRFKQQLQSLLETLSATEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFVDRFSLLAPEALDGSPDEITACKRILEKVGLQGYQIGKTKVFLRAGQMADLDTRRSEVLGKSASIIQRKVRSYLARRSFVLLRLSAIQIQAACRGQLARHVYEEKLREASSLMIQRCFRMHMARKAYKELYVSAVSIQTGMRGMAARSELRFRKQTRAAIVIQSHCRKYLAQHHFKDLKKAAIITQCAWRGKVARRELRKLKMAAKETGALQAAKNKLEKQVEDLTLRLQLEKRLRVDIEEAKTQENLRLQSALQDMQLQFKEAKVLFEKEREAAKKAAERAPVIQEVPVVDNALLEKLTTENEKLKTMVSSLEKKIDETEKRYEEASKISEERLKQALDAESKIIQLKTTMQRLEEKFSDIESENQILRQQSLLNSNVKKMSEHLSTPADEKLENGHHVVEEHKAVSTPMKKFGTESDSKLRRSYIERQHENVDALINCVKNNIGFSHGKPVAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSAIENQDDNNLMAYWLSNTSALLFLLQQSLKSGGATDATPVKKPPNPTSLFGRMTMGFRSSPSSANLAAPALEVVRKVEAKYPALLFKQQLTAYVEKIYGIIRDNLKKELTSFLSLCIQAPRTSKGVLRSGRSFGKDSPLGHWQSIIESLNTLLCTLKENFVPPVLIQKIYTQTFSYINVQLFNSLLLRRDCCTFTNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDANYNTRSVSPDVLASMKVLMAEDSNNAVSDSFLLDDNSSIPFSVDDLSTSLQEKDFSNMKLADELLENPAFQFLKE 1476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3351 1476 Pfam Myosin N-terminal SH3-like domain 11 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Sto13g3351 1476 Coils Coil 940 974 - -
Sto13g3351 1476 PRINTS Myosin heavy chain signature 93 112 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto13g3351 1476 PRINTS Myosin heavy chain signature 150 175 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto13g3351 1476 PRINTS Myosin heavy chain signature 197 224 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto13g3351 1476 PRINTS Myosin heavy chain signature 430 458 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto13g3351 1476 PRINTS Myosin heavy chain signature 505 533 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto13g3351 1476 ProSiteProfiles IQ motif profile. 705 732 IPR000048 GO:0005515
Sto13g3351 1476 PANTHER MYOSIN 7 521 - -
Sto13g3351 1476 PANTHER MYOSIN 522 1474 - -
Sto13g3351 1476 Gene3D Myosin VI head, motor domain, U50 subdomain 313 447 - -
Sto13g3351 1476 SMART DIL_2 1297 1404 IPR002710 -
Sto13g3351 1476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 751 IPR027417 -
Sto13g3351 1476 CDD MYSc_Myo11 77 688 IPR036018 -
Sto13g3351 1476 Pfam Myosin head (motor domain) 521 688 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto13g3351 1476 Pfam Myosin head (motor domain) 65 447 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto13g3351 1476 Coils Coil 982 1016 - -
Sto13g3351 1476 Gene3D - 12 56 IPR008989 GO:0003774|GO:0005524|GO:0051015
Sto13g3351 1476 Pfam DIL domain 1298 1401 IPR002710 -
Sto13g3351 1476 ProSiteProfiles Myosin motor domain profile. 63 700 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto13g3351 1476 ProSiteProfiles Dilute domain profile. 1121 1422 IPR002710 -
Sto13g3351 1476 Gene3D - 752 800 - -
Sto13g3351 1476 Gene3D - 801 850 - -
Sto13g3351 1476 Gene3D - 702 751 - -
Sto13g3351 1476 ProSiteProfiles IQ motif profile. 822 851 IPR000048 GO:0005515
Sto13g3351 1476 CDD MyosinXI_CBD 1072 1445 IPR037975 GO:0007015
Sto13g3351 1476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 753 851 IPR027417 -
Sto13g3351 1476 Gene3D - 634 701 - -
Sto13g3351 1476 ProSiteProfiles IQ motif profile. 799 825 IPR000048 GO:0005515
Sto13g3351 1476 Coils Coil 845 879 - -
Sto13g3351 1476 Gene3D Kinesin motor domain 62 294 IPR036961 -
Sto13g3351 1476 Gene3D - 468 520 - -
Sto13g3351 1476 ProSiteProfiles IQ motif profile. 726 755 IPR000048 GO:0005515
Sto13g3351 1476 SMART MYSc_2a 58 701 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto13g3351 1476 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 9 58 IPR004009 GO:0003774|GO:0005524|GO:0016459
Sto13g3351 1476 Pfam IQ calmodulin-binding motif 754 772 IPR000048 GO:0005515
Sto13g3351 1476 Pfam IQ calmodulin-binding motif 705 723 IPR000048 GO:0005515
Sto13g3351 1476 Pfam IQ calmodulin-binding motif 824 843 IPR000048 GO:0005515
Sto13g3351 1476 Pfam IQ calmodulin-binding motif 800 820 IPR000048 GO:0005515
Sto13g3351 1476 Pfam IQ calmodulin-binding motif 729 746 IPR000048 GO:0005515
Sto13g3351 1476 Gene3D - 521 591 - -
Sto13g3351 1476 PANTHER MYOSIN-14 522 1474 - -
Sto13g3351 1476 PANTHER MYOSIN-14 7 521 - -
Sto13g3351 1476 SMART iq_5 798 820 IPR000048 GO:0005515
Sto13g3351 1476 SMART iq_5 702 724 IPR000048 GO:0005515
Sto13g3351 1476 SMART iq_5 773 795 IPR000048 GO:0005515
Sto13g3351 1476 SMART iq_5 821 843 IPR000048 GO:0005515
Sto13g3351 1476 SMART iq_5 750 772 IPR000048 GO:0005515
Sto13g3351 1476 SMART iq_5 725 747 IPR000048 GO:0005515
Sto13g3351 1476 ProSiteProfiles IQ motif profile. 774 803 IPR000048 GO:0005515
Sto13g3351 1476 ProSiteProfiles IQ motif profile. 751 780 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3351 Sto-Chr13 36902305 36916991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3351 3 1474 Myosins gene family AT5G43900 71.279 0.0 2203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3351 K10357 - gmx:100791070 2513.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0772 8 4868063 4880377 Sto13g3351 13 36902305 36916991 CCT
Sto13g3993 13 40735282 40746017 Sto13g3351 13 36902305 36916991 CCT
Sto13g3351 13 36902305 36916991 Sto13g3351 13 36902305 36916991 ECH