Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3343 ATGGAGAGTGATTGTGGAGGGAGAGAAATAAGAGCTCTGATAGTGGATGATAGCGCAGTGATGAGAATGATTCACGAAGATATGTTGGGAACAGTTGGAGTGAAAAAGAAGGAGGTTGCCCAAAATGGCAAAGAAGCCATTGACATCATTCTTCACAACTCTCCCAAAACTTTTGACCTCATTCTCATGGACTTGGATATGCCTATTATGAATGGCATCGAGgcaACGAGGGCACTTCGGTCAATGGGAGTTCAAAGCAAGATCGCAGGAGTTTCAGGAAGAAGCAGTGTGGAAGCACAAGAGTTCATGGACGCAGGTCTTGATTACTACCAACAGAAGCCCTTGACCATTGCTAAGCTTTCACAAATTATTCACGACAtccatcaatttcatatttaa 399 0.416 MESDCGGREIRALIVDDSAVMRMIHEDMLGTVGVKKKEVAQNGKEAIDIILHNSPKTFDLILMDLDMPIMNGIEATRALRSMGVQSKIAGVSGRSSVEAQEFMDAGLDYYQQKPLTIAKLSQIIHDIHQFHI 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3343 132 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 128 - -
Sto13g3343 132 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 7 128 - -
Sto13g3343 132 SUPERFAMILY CheY-like 9 129 IPR011006 -
Sto13g3343 132 ProSiteProfiles Response regulatory domain profile. 11 128 IPR001789 GO:0000160
Sto13g3343 132 Pfam Response regulator receiver domain 13 124 IPR001789 GO:0000160
Sto13g3343 132 CDD REC_hyHK_CKI1_RcsC-like 13 124 - -
Sto13g3343 132 SMART REC_2 10 124 IPR001789 GO:0000160
Sto13g3343 132 Gene3D - 2 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3343 Sto-Chr13 36836793 36837281 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3343 10 124 Response Regulator Gene Family AT3G04280 43.220 4.55e-22 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto13g3343 Response_reg 2.8e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3343 - - pvy:116136784 138.658