Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3327 ATGGGAGAGGGAGTAGTTTGTGTCGAAGTATTAGCAGATGGAAGGAGTGACAAAGATGAGACATCGAGAACGGAATTAAAGCGGGATTACCAAAGTCTTGCTGATGCTGAACCTGACTCCTCTCCAAATAAGAAACAAGCAAAAGAAGTTTCAAATGATGATGTGCGCTCAGAGGTTTCAAATCCCAATATTTCTTCGAAAGAGAATGTCTTAACTTTTCAAGATATTAGTAGCCAACCAACTGAGTTGGCAAATACTAGCCAGGCGGAGTGTGGGGAAGTAACATCCACATGTTTGGAGAATTCAAGTTCGGACGAAACATTGAGTGACGGAGGGGGTGATCATAATAATACGTCTCAGAATGATAAGGGCACGAGTGCTGCAATGACGTCCTGTGTTGTGCTGGAAATTCCCAAGCATGTTAGTTCATCTGGAATCAGGAAGATTACTTTTAAGTTCAGTAAAAAGAAGGAGGACTATGATTATCAGTCATTTGATACTACTACTGGATATCCATATGATGAAGAGCCCTTGGTGAAGGCTAATTGTACCTCAGGGATGTTGGATAGCTCATATGGAATGGAATATGTTCAAACTGGAGATTTTAATTTGTATGCACGAAATATGGAATTGAAAATGTCCAAGAAGGTAGTCCCTAGCTGCTATCCTACAAATGTTAAAAAACTGTTATCTACTGGTATCCTTGATGGAGCTCgggtgaaatatatatatactttcaacGCTGGAGAGATTGAGCTACCTGGGATTATTCAGGGTGGTGGATATTTGTGTGGCTGCTCAACGTGTAGTTTCTCCAGGGTGCTAAGTGCGTATGAGTTTGAGCAACATGCTGGTGCCAAGACTAGACATCCAAATAATCACATATTCCTGGAGAATGGAAGAccaatatatagtattataCAGGAAATAAAAACTGCTCCACTTAGCATATTAGATGATGTTATAAGGAATATTGCTGGTTCATCTGTCAATGAAGAGTCTTTCAAGATTTGGAAAGCAAGTCTTCTACAAAGGAACGGCAAGGTTGAGGCAGAAAAGAATCATAACTCCAAGCTTGTTGGCATGCCTCATACAAACATAAGATCAAGCTCCTCTTCTAACTCAGGTCTACAACCAAAGAAAAGTGCTGATGGTTGCACTAAGCGAAGGGATAATGATTTGCATAGGTTACTCTTTATGCCAAATGGACTACCAGATGGGGCTGAATTGGCTTACTATGTCAAAGGACAGAAACTACTTGGAGGTTACAAACAGGGAAATGGTATTGTTTGTGGTTGTTGTGATAGAGAGATAAGCCCTTCACAATTTGAAGCTCATGCTGGAATGGCTGCCCGACGGCAACCTTATCGCCATATATATACTTCCAACGGATTAACACTTCATGATATAGCTCTTTCTTTGGCAAATGGCCAAAACCTTACCACTGGAGATAGTGATGACATGTGTGCAGTATGTGGAGATGGAGGGGATTTGATTCTTTGCAATGGATGCCCTAGGGCTTTCCATGCAGGCAACAGCAGAGAATCTTCTTCAGCGCGGCCAATTATGATAAGGTTGACTCGTGTTGTTAAAGCATCGGAGTATGAAATGGGTGGCTGTGTTGTTTGCAGGGAACATGATTTTAGTGTTGCTAAATTTGATGAGCGAACAGTTATAATTTGTGATCAGTGTGAGAAGGAGTATCATGTTGGATGCTTGCGAGACAGTGGGCTATGTGAGTTGCAAGAATTGCCCAAGGACAAGTGGTTTTGTTGTGATGACTGTAATCGGATATATGTGGCCTTACAGAAGTCAGTTTCTGCTGGAGCAGAGATTATACCAGCTTCCTTGTCAGTCCTAATAAATAGGAAGCATGAGGACAGGGGCTTATGTATTGATGGAGGCATCGATGATATTCAGTGGCGAATTCTGAGTGGGAAAAGTCGTTATCCAGAACATTTACCATTACTCTCAAGGGCTGCTGCAATTTTTCGAGAATGTTTTGATCCTATTGTTGCAATATCCGGGCGTGACCTGATTCCAGTTATGGTCTATGGGAGAAATATTTCAGGCCAAGAATTCGGGGGGATGTATTGCATTGTTTTAATTGTGAAATCTGTTGTTGTGTCTGCTGGGCTACTTAGGATTTTTGGTCGAAATGTTGCTGAGCTTCCGCTGGTAGCTACAAGTAGAGAACATCAAGGAAAAGGTTATTTTCAAGTATTATTCTCTTGCATAGAGAAGTTGCTGTCTTCCCTGAATGTGGAAAAGCTTGTGCTCCCTGCAGCTGAGGATGCTGAATcaatttggaccaaaaaattaGGCTTTCGAAAGATGAGTGAAGATCAGGACCTGAGCGTTTGGTTGGTCTTGAGATCCTCTGCTAGGATAGTTAAACTGCCTCGTGTGATTAAATGTTGTAAGAATGGGGTATCCAAATATCTCAGAGAAGTGCAGCTCACACTCTTCAATAAAACTTCAATGCTGGAGAAGGAAGTGCAGCTGGTGACAGAATGA 2517 0.4096 MGEGVVCVEVLADGRSDKDETSRTELKRDYQSLADAEPDSSPNKKQAKEVSNDDVRSEVSNPNISSKENVLTFQDISSQPTELANTSQAECGEVTSTCLENSSSDETLSDGGGDHNNTSQNDKGTSAAMTSCVVLEIPKHVSSSGIRKITFKFSKKKEDYDYQSFDTTTGYPYDEEPLVKANCTSGMLDSSYGMEYVQTGDFNLYARNMELKMSKKVVPSCYPTNVKKLLSTGILDGARVKYIYTFNAGEIELPGIIQGGGYLCGCSTCSFSRVLSAYEFEQHAGAKTRHPNNHIFLENGRPIYSIIQEIKTAPLSILDDVIRNIAGSSVNEESFKIWKASLLQRNGKVEAEKNHNSKLVGMPHTNIRSSSSSNSGLQPKKSADGCTKRRDNDLHRLLFMPNGLPDGAELAYYVKGQKLLGGYKQGNGIVCGCCDREISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDIALSLANGQNLTTGDSDDMCAVCGDGGDLILCNGCPRAFHAGNSRESSSARPIMIRLTRVVKASEYEMGGCVVCREHDFSVAKFDERTVIICDQCEKEYHVGCLRDSGLCELQELPKDKWFCCDDCNRIYVALQKSVSAGAEIIPASLSVLINRKHEDRGLCIDGGIDDIQWRILSGKSRYPEHLPLLSRAAAIFRECFDPIVAISGRDLIPVMVYGRNISGQEFGGMYCIVLIVKSVVVSAGLLRIFGRNVAELPLVATSREHQGKGYFQVLFSCIEKLLSSLNVEKLVLPAAEDAESIWTKKLGFRKMSEDQDLSVWLVLRSSARIVKLPRVIKCCKNGVSKYLREVQLTLFNKTSMLEKEVQLVTE 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3327 838 ProSiteProfiles Zinc finger PHD-type profile. 537 598 IPR019787 -
Sto13g3327 838 MobiDBLite consensus disorder prediction 359 381 - -
Sto13g3327 838 MobiDBLite consensus disorder prediction 41 55 - -
Sto13g3327 838 SUPERFAMILY FYVE/PHD zinc finger 484 510 IPR011011 -
Sto13g3327 838 ProSitePatterns Zinc finger PHD-type signature. 540 595 IPR019786 -
Sto13g3327 838 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 648 796 IPR000182 GO:0016407
Sto13g3327 838 SMART PHD_3 488 519 IPR001965 -
Sto13g3327 838 SMART PHD_3 539 596 IPR001965 -
Sto13g3327 838 MobiDBLite consensus disorder prediction 1 70 - -
Sto13g3327 838 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 479 521 IPR013083 -
Sto13g3327 838 MobiDBLite consensus disorder prediction 353 388 - -
Sto13g3327 838 MobiDBLite consensus disorder prediction 56 70 - -
Sto13g3327 838 MobiDBLite consensus disorder prediction 100 124 - -
Sto13g3327 838 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 536 598 IPR013083 -
Sto13g3327 838 Pfam Tify domain binding domain 255 309 IPR032308 -
Sto13g3327 838 Pfam Tify domain binding domain 422 471 IPR032308 -
Sto13g3327 838 SUPERFAMILY FYVE/PHD zinc finger 536 593 IPR011011 -
Sto13g3327 838 MobiDBLite consensus disorder prediction 12 34 - -
Sto13g3327 838 Gene3D - 638 789 - -
Sto13g3327 838 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 369 785 - -
Sto13g3327 838 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 25 362 - -
Sto13g3327 838 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 690 781 IPR016181 -
Sto13g3327 838 PANTHER AUTOIMMUNE REGULATOR 369 785 - -
Sto13g3327 838 PANTHER AUTOIMMUNE REGULATOR 25 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3327 Sto-Chr13 36735121 36742763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3327 1 838 PHD Transcription Factor Family AT3G53680 49.891 0.0 851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3327 - - gmx:100794242 1313.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3327 13 36735121 36742763 Sto13g3327 13 36735121 36742763 ECH