Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3304 ATGAAAGCAATTCCGATAGATTCAGTGACTGGAGATGCAACTACGCATGCTAATTCATTCCACGATCAGATCTCCTTCGCTTCAGCAACAAccagaaggagagagagagagaggttgcAAGTTGCAATGGCAATGCAGCGTTCGTTGTTCAATAACGCGAGGATTAAGGTGCACGAGTTGAGGAACAAAAACAAGGCAGAGCTGCTGAACCAGTTGAAGGATCTGAAGGCGGAGCTCGCTCTACTCCGTGTCGCCAAGGTCACCGGCGGTGCCCCTAACAAGCTATCCAAGATAAAAGTGGTGAGGTTGTCTATAGCGCAGGTGTTGACCGTGATTTCCCAGAAGCAGAAAGCGGCTCTTAGAGAGGCTTACAAAAATAAGAAGTATTTGCCTCTTGATCTCCGTCCCAAGAAGACCCGAGCCATTCGCAGACGTCTCACTAAGCACCAGGCATCATTGAAGACAGAAcgtgagaagaagaaagaactgTACTTTCCATTGAGAAAATATGCCATCAAAGTGTAG 525 0.4286 MKAIPIDSVTGDATTHANSFHDQISFASATTRRRERERLQVAMAMQRSLFNNARIKVHELRNKNKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKELYFPLRKYAIKV 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3304 174 PANTHER 60S RIBOSOMAL PROTEIN L35-LIKE 53 174 - -
Sto13g3304 174 PANTHER 60S RIBOSOMAL PROTEIN L35 53 174 IPR045059 GO:0000463|GO:0022625
Sto13g3304 174 TIGRFAM L29: ribosomal protein uL29 59 115 IPR001854 GO:0003735|GO:0005840|GO:0006412
Sto13g3304 174 Coils Coil 58 85 - -
Sto13g3304 174 Pfam Ribosomal L29 protein 59 115 IPR001854 GO:0003735|GO:0005840|GO:0006412
Sto13g3304 174 Gene3D - 52 128 IPR036049 GO:0003735|GO:0005840|GO:0006412
Sto13g3304 174 CDD Ribosomal_L29_HIP 59 115 - -
Sto13g3304 174 SUPERFAMILY Ribosomal protein L29 (L29p) 55 116 IPR036049 GO:0003735|GO:0005840|GO:0006412
Sto13g3304 174 Hamap 50S ribosomal protein L29 [rpmC]. 55 115 IPR001854 GO:0003735|GO:0005840|GO:0006412
Sto13g3304 174 Gene3D - 129 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3304 Sto-Chr13 36610059 36613352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3304 53 174 Cytoplasmic Ribosomal Protein Gene Family AT2G39390 90.164 5.49e-73 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3304 K02918 - ini:109186534 226.098