Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3303 ATGAGAAACCTGTGTTTTCACCCTAAGACACCCTCGTTCTCCATTTCCCGCCATTCTCCACCTTCATCACCTTCTGTTTCAACCCCTCGGCGGCCGAGTTCCTCTGATTCTAGCGTCTCCGACTGCATCGAAGAAGCTGAAGCGTTGATTCTGAAATGGAACGCCGACACCTCCTCATACGCCCAAGTCACCTCCCTCTTCTACCAACACAAAACCGAGGCCGCGCGCTACATCAAGTGCGCCAACCAACTCCACCAGGCCATGCACTTGCTGGAGTTGGACTCACACAAACTCGTTCTTGCTCAAAATTTGATGCAGATGGCCATGAAGAGGCTTCAGAAGGAATTCTACCAGATCCTATCCATGAATCGCGCTCACTTGGATCCCGAATCTGTTTCCATTAGATCATCTCGAACCTCCATCAGCACCTCCGATTATGATGAAATTGATGCGGACGACGATGATCAGGCCGCAGGCGATTCCATATCCGAAGTCGAACGAGTTTCTTCCGTTGCCATGGGAGATCTGAGATCCATAGCAGACTGCATGATTTCTTCCGGTTATGCGAAGGAATGTGTGAGCGTCTACAAGAGTATTAGAAAATCGATCATCGATGAAGGAATTTACCGTCTGAACGTTGAGAAATTGAGCTCCACGCAGATTCATAAGATGGACTGGGAGGTTGTTGAGTTGAAAATCAAGAGTTGGTTGGAGGCGCTGAAGGTTTCCGTGAAGACGCTCTTCAACGGAGAGAGAATCTTATGCGATCACGTCTTTGGCTCTTCAGAAGCCATTAGAGAATCTTGCTTCGCCGACATTTCCAGAGACGGAGCCACTATTCTATTCAGATTCCCCGAACTCGTCGcccaaaaaacaaagaaatcgCCGCCGGAGAAGATGTTTCGCATGCTCGACATGTACTCTGCATTATCTGCACTCTGGCCGGAGATCGAATCCATCTTCTTGTTCGATTCAACTTCCGCAATTCGATCTCAAGTCCTTACCACACTCGTTCGACTTAGCGACTCCGTACGAACAATGTTTTTAGAATTCGAAGCCACAATTCAGAAAGACTCTTCGAGTTCTAGAACAGCTATAAGTAACGGCGGTGTTTACCCGCTTACGACACAAGCAATGAACCACCTCTCTCTTCTCGCAGATTACAGTAATGTACTCTCTGAAATGTTCGAGGATTGGCCTCCGCCGCCAAAATGGTCGCTGTCGTCGTCGCTGCCGGAGCCTTTCCAATTCCAAGACAGTTCAGACTCCGACGAATTGTCGACGACGGCGCCGTCGTTCTCCACGCGGTTAGCTTGGCTAATTCTCCTTCTCCTATTTAAGCTCGATGGCAAAGCGGAGCATTCGAAGGATGTTTCCTTGAGTTACTTGTTTCTAGCAAATAACCTTCACCATATGATAGCCAGAGTCCGTGCCTCGAACTTGCAGACGGTGCTGGGATACGATTGGGTGGTGAAGCACGAAGCCAAGGTGAAACGGTTCGTAACGAACTACGAGAACGTGGCATGGGGCGAAGTGTTTTCGTCCTTGCCTGAAAATCCCAAGGCGGCTATATCGCTGGAAGAGGCGAAGGTTATATTTGACAACTTCAGCTTTAATTTCGAGAAAGCGTATCGGAAGCAGAATTCGTTTATCGTCGCGGACTGGAAACTCGGAGACGAAATCAAGGGGTCCATAGCGAGAAAAATAGTCCCCATTTATCGGGAATTTTATGATACGCATAGGATTCTTGCGGGTTCGTTGAGAAACATGGCAGAGTATGTCCGATTTACCCCCGACGATGTTGAGAATTATGTGTCCAACCTCTTCTTTTCGGGGAAAAGCTCCGGTGGTGGACCACCGTCGCCGTCATCGGTAGCGTCATCTCCTCGTCGGTAA 1896 0.4847 MRNLCFHPKTPSFSISRHSPPSSPSVSTPRRPSSSDSSVSDCIEEAEALILKWNADTSSYAQVTSLFYQHKTEAARYIKCANQLHQAMHLLELDSHKLVLAQNLMQMAMKRLQKEFYQILSMNRAHLDPESVSIRSSRTSISTSDYDEIDADDDDQAAGDSISEVERVSSVAMGDLRSIADCMISSGYAKECVSVYKSIRKSIIDEGIYRLNVEKLSSTQIHKMDWEVVELKIKSWLEALKVSVKTLFNGERILCDHVFGSSEAIRESCFADISRDGATILFRFPELVAQKTKKSPPEKMFRMLDMYSALSALWPEIESIFLFDSTSAIRSQVLTTLVRLSDSVRTMFLEFEATIQKDSSSSRTAISNGGVYPLTTQAMNHLSLLADYSNVLSEMFEDWPPPPKWSLSSSLPEPFQFQDSSDSDELSTTAPSFSTRLAWLILLLLFKLDGKAEHSKDVSLSYLFLANNLHHMIARVRASNLQTVLGYDWVVKHEAKVKRFVTNYENVAWGEVFSSLPENPKAAISLEEAKVIFDNFSFNFEKAYRKQNSFIVADWKLGDEIKGSIARKIVPIYREFYDTHRILAGSLRNMAEYVRFTPDDVENYVSNLFFSGKSSGGGPPSPSSVASSPRR 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3303 631 Pfam Exo70 exocyst complex subunit 234 606 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sto13g3303 631 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 615 IPR004140 GO:0000145|GO:0006887
Sto13g3303 631 MobiDBLite consensus disorder prediction 9 38 - -
Sto13g3303 631 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 1 615 - -
Sto13g3303 631 Gene3D Exocyst complex component Exo70 56 615 - -
Sto13g3303 631 MobiDBLite consensus disorder prediction 1 38 - -
Sto13g3303 631 SUPERFAMILY Cullin repeat-like 39 609 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3303 Sto-Chr13 36599759 36601654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3303 1 609 EXO70 exocyst subunit family AT3G09520 51.618 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3303 K07195 - gmx:100786852 688.337