Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3293 ATGGGTAAGGGAGGCCAAAACTTTGGCAAACGAGAAAATCTCAGTTCCAATACTTCGGACGGGGACATCTTCAAGGCTTGGGCCAAGGATGTGCAGGAATGTGAAAATCATTTTAAGGTGAAGGTTAAAGCGGGTTTAAGTTCCGATGAGGTTGAGAACCGCCGCCGGATCCATGGCTGGAACGAATTGGAGAAGCACGAGGGGCAGTCGATTTGGAGTCTGGTCCTTGAGCAGTTTAACGACACATTGGTTCGAATTCTGCTTGCCGCTGCCATCATATCCTTCGTCTTGGCTTGGATGGATGGAGAGGAAGGCGGAGAGAAGGAGATTACAGCTTTCGTGGAGCCCTTGGTGATATTTTTGATATTGATTGTTAATGCAATTGTGGGAGTATGGCAAGAGAGCAATGCGGAGAAGGCTCTTGAAGCATTGAAGGAGATTCAGTCTGAGCATGCGACCTTGATTCGTGATAATAAGAAGATTCCAAGCATGCCAGCGAAGGAACTCGTGCCCGGTGATATTGTTGAGCTTAAGGTTGGGGATAAGGTTCCAGCTGATATGCGGGTTGTGGAACTGATTAGCTCTACTTTACGAGTAGAACAGGGATCCTTGACTGGAGAGAGTGAAGCTGTAATTAAGACTAACAAGGCTGTCTCCGAGGATGCTGATATTCAAGGCAAGACATGTATGGTTTTCGCGGGGACTACAGTTGTTAATGGGAATTGCATTTGCTTGGTTACTCAGACAGGCATGGAAACGGAGATTGGGAAGGTACACCAGCAGATACATGTGGCAGCGCAGAGTGAGGAAGACACCCCATTAAAGAAGAAGCTCAATGAGTTTGGAGAGACGCTAACAATTCTAATTGGAGTTGTATGTGTTTTGGTATGGCTCATCAACGTTAAGTACTTCCTTGCATGGGAATATGTGGATGGGTGGCCAAGGAACTTTAAGTTTTCGTTTGAGAAGTGCACATATTACTTTGAGATTGCTGTGGCATTGGCTGTTGCTGCTATACCGGAAGGCTTGCCCGCAGTCATTACAACTTGCCTGGCCCTAGGTACTCGCAAGATGGCTCAGAAGAATGCACTTGTTCGAAAACTACCAAGCGTGGAGACTCTGGGTTGTACAACTGTGATCTGTTCAGATAAAACGGGTACATTGACAACAAACCAGATGGCAGCGACAAAGCTTGTAGCTATTGGTCCTAATGCAGATGCTCTGCGAGCCTTCAAGGTGGAAGGGACTACTTACAATCCTTCTGATGGTAAAATAGAGGATTGGCCAGCTGGTCGAATGGATGCTAATCTTGAGATGATAGCAAAAATAGCTTCTGTCTGTAATGACGCTGGAGTTACACAGTCAGAGCATAAATTCGTGGCTCATGGAATGCCTACAGAGGCAGCCTTAAAGACTATATTTTTGTGCTTTCTCTTGGGAATCCAGGTTTTGGTAGAGAAGATGGGTCTTCCTGAAGAAGCCCGTGATGTAAAAGAAGCAAGTACAAGTACCTTACTTTGTTGTTGTGACTGGTGGAACAAACATGACCGGCGAATTGCTACTCTTGAATTTGACCGTGATAGGAAGTCAATGGGTGTTATTGTCAACTCTCGTCAGGGGAAAACGTCACTGCTGGTAAAGGGTGCTGTTGAAAATTTGTTAGAAAGAAGCTCTAAAATTCAGTTGCGTGATGGTTCTGTTGTGAAACTGGATGATAATGCCAGGAACCTTATATTGCAAGCACTTCATGAAATGTCCACTGGTGCATTAcggtgtttaggatttgcatACAAAGATGATCTCCCTATGTTTGAAGACTACTGTGGTAATGATGATCATCCAGCTCACCAGCTTTTGCTTAACCCTTCCAACTACTCTTCAATTGAAAGTGAACTTATCTTTGTTGGTTTGGTTGGATTGAGGGATCCCCCTAGGGAGGAGGTACACCAAGCAATTGAGGACTGCAGAGCTGCTGGAATTCGTGTTATAGTTATTACTGGAGACAACAAGAACACTGCAGAAGCTATATGCCGTGAAATAGGTGTATTTGGATCGAATGAAGATGTTAGTTTGAGAAGTATAACTGGGAGAGATTTTATGGAGCTACGGGATAAGAAGTCCTATCTGAGACAGAGTGGTGGGCTTCTGTTTTCAAGGGCTGAACCTAGGCACAAACAAGAGATAGTGAGGCTGCTCAAGGAGGAAGGAGAGGTGGTTGCCATGACTGGAGATGGTGTGAATGATGCACCTGCCTTGAAGCTTGCTGATATTGGCATTGCTATGGGCATTGCAGGGACAGagGTGGCTAAGGAAGCCTCGGATATGGTATTGGCAGATGATAATTTTAGTACAATTGTTGCTGCTGTTGGTGAAGGCAGATCTATCTACAATAACATGAAGGCTTTTATCAGGTACATGATTTCTTCAAATATTGGTGAGGTTGTCTCTATATTTCTAACGGCTGCATTAGGTATTCCAGAAGGATTGATTCCCGTCCAGCTATTGTGGGTCAATCTAGTCACAGATGGACCACCTGCTACAGCTTTGGGATTTAACCCTCCAGATAAGGATATAATGAAGAAGCCTCCTCGTCGTAATGATGACTCACTAATTAATGCATGGATTTTATTCCGCTATCTGGTTATTGGGATGTATGTGGGATGTGCTACAGTTGGTATATTCATCATATGGTATACATATGGTTCTTTCTTGGGTATTGACCTTTCCCAGGATGGCCATAGTCTTGTCACTTATTCCCAACTTGCCAACTGGGGTGAATGCTCTTCATGGAAGAATTTCTCTGCTTCTCCATTCACAGCAGGTGATAAAGTCTTCTCTTTTGGTGACTCCCCCTGTGACTATTTCAAGACTGGAAAAGTAAAAGCTATGACGCTCTCCCTATCTGTGTTGGTTGCCATTGAAATGTTCAATTCCCTGAACGCCCTTTCTGAGGATGGAAGCCTTTTAACAATGCCCCCATGGAAAAATCCTTGGCTTCTCTTGGCAATGTCCGTGTCATTTGGTTTGCACTTCCTGATATTATATGTGCCATTCTTAGCACAAATATTTGGCATTGTGCCCCTCAGCTTAAATGAGTGGCTTTTGGTCTTGGTTGTTGCTTTCCCCGTCATTCTTATTGACGAGATTCTGAAATTTGTGGGGAGGTGTACAAGTGGGCCTCGACCAAAACCTAGGGAGAAAACAGAGTAG 3210 0.4421 MGKGGQNFGKRENLSSNTSDGDIFKAWAKDVQECENHFKVKVKAGLSSDEVENRRRIHGWNELEKHEGQSIWSLVLEQFNDTLVRILLAAAIISFVLAWMDGEEGGEKEITAFVEPLVIFLILIVNAIVGVWQESNAEKALEALKEIQSEHATLIRDNKKIPSMPAKELVPGDIVELKVGDKVPADMRVVELISSTLRVEQGSLTGESEAVIKTNKAVSEDADIQGKTCMVFAGTTVVNGNCICLVTQTGMETEIGKVHQQIHVAAQSEEDTPLKKKLNEFGETLTILIGVVCVLVWLINVKYFLAWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAATKLVAIGPNADALRAFKVEGTTYNPSDGKIEDWPAGRMDANLEMIAKIASVCNDAGVTQSEHKFVAHGMPTEAALKTIFLCFLLGIQVLVEKMGLPEEARDVKEASTSTLLCCCDWWNKHDRRIATLEFDRDRKSMGVIVNSRQGKTSLLVKGAVENLLERSSKIQLRDGSVVKLDDNARNLILQALHEMSTGALRCLGFAYKDDLPMFEDYCGNDDHPAHQLLLNPSNYSSIESELIFVGLVGLRDPPREEVHQAIEDCRAAGIRVIVITGDNKNTAEAICREIGVFGSNEDVSLRSITGRDFMELRDKKSYLRQSGGLLFSRAEPRHKQEIVRLLKEEGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYNNMKAFIRYMISSNIGEVVSIFLTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRNDDSLINAWILFRYLVIGMYVGCATVGIFIIWYTYGSFLGIDLSQDGHSLVTYSQLANWGECSSWKNFSASPFTAGDKVFSFGDSPCDYFKTGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWKNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSLNEWLLVLVVAFPVILIDEILKFVGRCTSGPRPKPREKTE 1069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3293 1069 Pfam E1-E2 ATPase 147 361 - -
Sto13g3293 1069 Pfam haloacid dehalogenase-like hydrolase 378 756 - -
Sto13g3293 1069 Gene3D - 391 643 IPR023299 GO:0000166
Sto13g3293 1069 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 4 1063 - -
Sto13g3293 1069 SUPERFAMILY HAD-like 633 846 IPR036412 -
Sto13g3293 1069 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 118 308 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto13g3293 1069 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 716 823 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto13g3293 1069 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 320 402 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto13g3293 1069 Pfam Cation transporting ATPase, C-terminus 827 1053 IPR006068 -
Sto13g3293 1069 SFLD p-type atpase 362 794 IPR044492 -
Sto13g3293 1069 SUPERFAMILY Calcium ATPase, transmembrane domain M 25 1056 IPR023298 -
Sto13g3293 1069 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 388 640 IPR023299 GO:0000166
Sto13g3293 1069 SMART Cation_ATPase_N_a_2 25 99 IPR004014 -
Sto13g3293 1069 PRINTS P-type cation-transporting ATPase superfamily signature 200 214 - -
Sto13g3293 1069 PRINTS P-type cation-transporting ATPase superfamily signature 381 395 - -
Sto13g3293 1069 PRINTS P-type cation-transporting ATPase superfamily signature 636 647 - -
Sto13g3293 1069 PRINTS P-type cation-transporting ATPase superfamily signature 658 668 - -
Sto13g3293 1069 PRINTS P-type cation-transporting ATPase superfamily signature 742 761 - -
Sto13g3293 1069 PRINTS P-type cation-transporting ATPase superfamily signature 766 778 - -
Sto13g3293 1069 Gene3D - 77 1055 - -
Sto13g3293 1069 Gene3D - 378 787 IPR023214 -
Sto13g3293 1069 Gene3D - 45 265 - -
Sto13g3293 1069 SUPERFAMILY Calcium ATPase, transduction domain A 150 260 IPR008250 -
Sto13g3293 1069 ProSitePatterns E1-E2 ATPases phosphorylation site. 383 389 IPR018303 -
Sto13g3293 1069 SFLD Haloacid Dehalogenase 362 794 - -
Sto13g3293 1069 PANTHER CALCIUM-TRANSPORTING ATPASE 4 1063 - -
Sto13g3293 1069 Coils Coil 137 157 - -
Sto13g3293 1069 Pfam Cation transporter/ATPase, N-terminus 27 94 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3293 Sto-Chr13 36549375 36554748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3293 1 1065 Primary Pumps ATPases(2) AT1G07810 78.404 0.0 1707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3293 K01537 - gmx:100788807 1843.17