Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3285 ATGGTTAGATCATGCTGGAAGCCATCTGTGGAAGGTGAAGATGGAGAAGGAAGTGGGAGGGTTGATGGGCTTCTATGGCACAAGGACTTGGGAAGCCATGTTTATGGTGACTTCTCAATGGCTGTAGTTCAAGCCAATACTTCATTGGAAGATCGAAGCCAGCTGGAATCTGGACCCTTCTCTTCCAATCATAACAACAGCAACAACACGTGTCCTCAAGGCACCTTCATAGGTGTCTATGATGGTCACGGAGGATCAGAAGCCTCCCAATTCGTCACTGACAATCTCTTCACCAATCTCATGAGAATTGCAGATGAAGAAGGAGGGATGTCAGAGGAAGTGATAAGAAAAGCATACAGTGCAACAGAAAAGGGATTTCTCTCAGTGGTGAAGAGAAATTGGATGAGTAAGCCAGAGATTGCATCCACAGGGACATGCTGTTTGGTGGGGATAATCTGCAATGGGATGCTATATATTGGAAATTGTGGAGACTCTCGTGTGGTGTTAGGGAGATTAGAGAGAGGAATGAAGGAAGTTTCACCTATTCAACTATCTCAAGAACACAATGTTAACATTGAAAGAGTCAGAGATGAAGTTCGATCAAAGCACCCTTTTGATCCACAAATTGTGGTTATGAAACACCATGTTTGGCGTGTCAAAGGCCTCATACAGGTGTCTCGATCCATAGGAGATGCGTATCTGAAGAAGGCAGAATTTAACAGAGAGCCTCTGCCATTGAAGTATAGATTGGGTGAACCATTCTTCAAGCCAATTCTGAGCTGTGACCCATCAATATTAAGCCAGAAACTGCATCCAGATGATCAATTTCTCATATTTGCTTCTGATGGTTTGTGGGAGCATCTTAGCAACCAAGAGGCTGTGAGCATAGTGAGCAATAACCCACATCATGGCATAGCTCGGAGGCTGGTGAAAGCTGCAATGAGAGAAGCAGcaaagaagagagaaatgaGATTGACAGAGTTGGAGAAGATAGAAGAAGGAGCTCGGAGGAACTTTCATGATGATATAACAGTTGTGGTTGTATTTCTGAACCACAAACTCAGTGATAATAATACCTCACAATCACCTCGTGGCTCTCCTCTTTCACTTAGAGCACCTTCGCCTGCAAACACTAATTAG 1140 0.4342 MVRSCWKPSVEGEDGEGSGRVDGLLWHKDLGSHVYGDFSMAVVQANTSLEDRSQLESGPFSSNHNNSNNTCPQGTFIGVYDGHGGSEASQFVTDNLFTNLMRIADEEGGMSEEVIRKAYSATEKGFLSVVKRNWMSKPEIASTGTCCLVGIICNGMLYIGNCGDSRVVLGRLERGMKEVSPIQLSQEHNVNIERVRDEVRSKHPFDPQIVVMKHHVWRVKGLIQVSRSIGDAYLKKAEFNREPLPLKYRLGEPFFKPILSCDPSILSQKLHPDDQFLIFASDGLWEHLSNQEAVSIVSNNPHHGIARRLVKAAMREAAKKREMRLTELEKIEEGARRNFHDDITVVVVFLNHKLSDNNTSQSPRGSPLSLRAPSPANTN 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3285 379 SMART PP2C_4 27 348 IPR001932 -
Sto13g3285 379 MobiDBLite consensus disorder prediction 1 20 - -
Sto13g3285 379 PANTHER ALPHABET, ISOFORM E-RELATED 3 372 - -
Sto13g3285 379 MobiDBLite consensus disorder prediction 356 379 - -
Sto13g3285 379 CDD PP2Cc 71 350 IPR001932 -
Sto13g3285 379 Pfam Protein phosphatase 2C 51 319 IPR001932 -
Sto13g3285 379 Gene3D - 27 362 IPR036457 -
Sto13g3285 379 ProSiteProfiles PPM-type phosphatase domain profile. 37 350 IPR001932 -
Sto13g3285 379 SUPERFAMILY PP2C-like 66 351 IPR036457 -
Sto13g3285 379 PANTHER SERINE/THREONINE PHOSPHATASE FAMILY, 2C DOMAIN PROTEIN 3 372 - -
Sto13g3285 379 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3285 Sto-Chr13 36515684 36517121 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3285 1 363 PP2C-type Phosphatase Gene Family AT3G12620 63.115 4.41e-170 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3285 K01102 - gmx:100814123 568.54