Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3281 ATGGGTTGGATTCCATGTTCTGGAAATCCAGACggtaagaaaaagagaaagagtaagatgaagaagatggaagTGCAGGAGAGTATGGGTGACCATACCAAACCCATTCCAGGGAAGCTGAAGAGGAACTCATCCACGAATTCCATAGATCCCTCTAAAAATGGGAATTCTGATCACATTGCGGCTCAGACTTTCACATTCCGTGAGTTGGCGACAGCAACTAGAAATTTTAGGACAGAATGTCTTTTGGGTGAGGGAGGTTTTGGGAGAGTATACAAAGGGCGTTTAGACAGCACTAATCAGGTTGTCGCAATTAAGCAACTTGACCGAGATGGTCTGCAAGGGAATAGAGAATTCCTAGTTGAAGTTCTGATGTTAAGTCTACTTCACCACCCTAACCTCGTCAACCTTATTGGTTATTGTGCTGACGGTGATCAAAGGCTTCTTGTTTATGAATATATGCCTCTAGGATCCTTGGAAGACCACTTATATGATGTTTCTCTGGGTAAAAAGCGACTAGACTGGAACACGCGGATGAAAATAGCTGCTGGGGCAGCAAAGGGATTGGAATATCTACATGACAAAGCTAACCCTCCTGTTATATATCGAGATTTGAAATGTTCAAACATTTTGCTTGGGGAAGGGTATCATCCTAAGTTATCTGATTTTGGTTTGGCTAAACTTGGACCTGTTGGGGAAAACACCCATGTATCAACAAGGGTGATGGGTACCTATGGATATTGTGCTCCAGAGTATGCAATGACAGGTCAACTGACTCTGAAATCTGATGTTTATAGCTTTGGCATAGTTCTTCTGGAAATAATTACCGGCAGGAAAGCCATTGACAATTCAAAAGCTGCAGGAGAGCAGAATCTTGTTGCATGGGCAAAACCCTTGTTTAAGGATAGAAGAAAATTTTCACAAATGGCTGATCCAATGCTGCAAGGTCAGTACCCTCCAAGAGGTTTATACCAGGCGCTTGCTGTTGCAGCAATGTGTGTTCAGGAACAAGCAAATATGCGGCCAGTTATAGCTGATGTTGTCACTGCTTTGACTTACCTTGCTTCCCAGAGATATGACCCCAATTCTCACTCTCTTCAAAGCCCTCGTCTTGCCCCTCCTACTCCTACATCCAAGAGGGGACGATGA 1149 0.4238 MGWIPCSGNPDGKKKRKSKMKKMEVQESMGDHTKPIPGKLKRNSSTNSIDPSKNGNSDHIAAQTFTFRELATATRNFRTECLLGEGGFGRVYKGRLDSTNQVVAIKQLDRDGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLYDVSLGKKRLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGIVLLEIITGRKAIDNSKAAGEQNLVAWAKPLFKDRRKFSQMADPMLQGQYPPRGLYQALAVAAMCVQEQANMRPVIADVVTALTYLASQRYDPNSHSLQSPRLAPPTPTSKRGR 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3281 382 MobiDBLite consensus disorder prediction 1 57 - -
Sto13g3281 382 Gene3D Transferase(Phosphotransferase) domain 1 154 368 - -
Sto13g3281 382 SMART serkin_6 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3281 382 Gene3D Phosphorylase Kinase; domain 1 48 153 - -
Sto13g3281 382 Pfam Protein tyrosine and serine/threonine kinase 81 350 IPR001245 GO:0004672|GO:0006468
Sto13g3281 382 SUPERFAMILY Protein kinase-like (PK-like) 63 370 IPR011009 -
Sto13g3281 382 CDD STKc_IRAK 83 352 - -
Sto13g3281 382 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Sto13g3281 382 MobiDBLite consensus disorder prediction 361 382 - -
Sto13g3281 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Sto13g3281 382 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL7-RELATED 1 379 - -
Sto13g3281 382 MobiDBLite consensus disorder prediction 39 57 - -
Sto13g3281 382 MobiDBLite consensus disorder prediction 21 38 - -
Sto13g3281 382 ProSiteProfiles Protein kinase domain profile. 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3281 382 PANTHER OS07G0668900 PROTEIN 1 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3281 Sto-Chr13 36479684 36482051 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3281 31 356 Glycoside Hydrolase AT3G07070 66.258 3.60e-162 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Sto13g3281 PK_Tyr_Ser-Thr 9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3281 - - gmx:100776041 669.463