Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3280 ATGACAAGGGGTGTCCTCATGAGCTTTGATGGGGATGACAAAGAGTTTCAAGAATTAGCTCAACGTCTACGAGATGGTAAGAAAACCATCAAAGAAGGAGTTGCTGGTGATGAACATAGTTTGCGTGAGGATGATGAGTTGAAAAGTAATGGAACAGCTGAAGAAGTTAAGGTTGGACAAGGGGGGATTGTGGAAGCACCAGCTGTCCAGCATATACCACAACAGCCACAAGCAGCAATATGGGAGAGGTTCCTACATCTTAGATCACTTAAGGTCTTACTTGTAGAGATTGATGATTCTACTCGCCATGTTGTTGCTGCGCTGCTTCGAAATTGTAGTTATGAAGttattGAGGCAGCAAATGGCTTGCAAGCGTGGAAGATTTTGGAGGATTTAACAAATCATATAGATCTTGTTTTAACTGAGGTAGCAATGCCTTGCCTATCAGGCATTGCCCTTCTATCCAGAATTATGGCCCATAAAACACTGAAAAACATTCCAGTAATTATGATGTCATCTCATGACTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGTGCTGTTGACTTTCTAGTGAAACCTATACGGAAGAATGAGCTTAAAAACCTCTGGCAGCATGTTTGGAGGAGATGTCATAGTTCGAGTGGtagtggaagtgaaagtggcACACATACCCAGAAATCAGTTAAATCAAAGAGTCTTGAGAAGTCTGATAACAACAGTGGCAGCAACGATGAAGACGACAATGGAAGTATAGGCCTTAATAATGTGGATGGAAGTGACAATGGTAGTGGCACTCAGAGCTCATGGACCAAACAAGCTGTAGAGGTCGACAGTCCCAAACCTACTCAGTGGGATCATATAGCTGAGTGTCCTGATAGCACTTGTGCTCAAGTTGTTCATTCAAATGCTGAAGTATGTAGAAACAAGATGGTTCCTGTTGCCAAAAAGGAGTGTCCAGATCAGAAGGAGCAGCTTGAGCTGAAAGTTGACACGAGTAGGGATCTTGGCTTGATTCTTGATTATAGAAGCGAGGTTTTAGCCAATACTTCAGGTGAAAAACATAGCGGACCACTTGATATGGGATCCTCTAAATTCAATGAGCAACTTAATAGAGGACAGCTGGACCTTAATTGTGAAAATCCATCTAGCAAGTTAAGGTGCAAAGGTCCATTGATGTCTGATGCCATTAATAGCACATCTGATTCTCGGATTCATGGTGGAGAATTTGAAGCCACAAATAGAAGACTCAAGGCCTCAGATACTGGAAACAAAGCTGTTACGGATAATGAAGAATCACCTTCTCTTGAGCTCAGTTTAAAGAGACTTAGAGGGGTTAAAGATGCTGGGATTACGATTCAGGATGAGCGGAATGTTTTGAGACGTTCAGACCTTTCGGCCTTTTCAAGGTACAATTCAGCCTCAAATGCTAAGAAGTCTCCTGCTGGTTGTGCTGGAAGCAATTCTCCCCATAACAATAGCTTAGAATTTACAAAGAAAGATTCATCACGTGACATTCAATCTCATTCTAGTGACAATCCTCCTAACCAGAACTCAAATGGTGCAAGCAATAACAATGATATGGGCTCCACCACTGATAATGCTTTCACTAAATCTGCTGTTATAAGCAAGCCAACAGTGGCGTCACCAACCAAATGTTTGTATCAATCATCTGCTTTCCAGCCTATAAAGAACAATCTTATATGTGCCTCTCAACAAGTTGCAGTACATAATACTGAAGAAATGACAGCTTCAACTATGCTAGCACCGCCTGGAGGAGGCACGAATAAGGACTCTCCAACTCAGGACTTCCATGGTCTTTACAAAAATCATGGCTGCATTGCCAACAACATGCAGTGCCAGGTACCACCTGATCACGATGATGCATCATCAAAGAAAATGGCTGCTGCAGCTCCGCATTGTGGGTCATCAAATGTAGTTGAAATGCTAGTTGAAGGTAATGTTGGAAATTATAGTATCAATAGAAGTGTCTCAGGAAGCAACAATGGAAGCAATGGTCAAAATGGGAGCAGCACTGCAGTTAATGCTGGAGGGATAAACTTAGAAAGTAATAATGGAATTGCTGGGAATAGTGGAAGTGGTGATGCTAGTGGGAGTGGGAGTGCGAACAGAATAGATCCAAAAAAGTCTTCTCAAAGAGAAGCAGCCTTAACTAAATTTCGCcagaagagaaaagagaggtGCTTCCGGAAAAAGGTTCGGTACCAAAGTAGAAAGAAATTAGCTGAACAACGTCCTCGATTTCGTGGTCAATTTGTTCGACAGACCTCAAACGAAAATACAAGTGAGGCAACGGAGCCAACAGACAGCTGA 2337 0.4151 MTRGVLMSFDGDDKEFQELAQRLRDGKKTIKEGVAGDEHSLREDDELKSNGTAEEVKVGQGGIVEAPAVQHIPQQPQAAIWERFLHLRSLKVLLVEIDDSTRHVVAALLRNCSYEVIEAANGLQAWKILEDLTNHIDLVLTEVAMPCLSGIALLSRIMAHKTLKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTHTQKSVKSKSLEKSDNNSGSNDEDDNGSIGLNNVDGSDNGSGTQSSWTKQAVEVDSPKPTQWDHIAECPDSTCAQVVHSNAEVCRNKMVPVAKKECPDQKEQLELKVDTSRDLGLILDYRSEVLANTSGEKHSGPLDMGSSKFNEQLNRGQLDLNCENPSSKLRCKGPLMSDAINSTSDSRIHGGEFEATNRRLKASDTGNKAVTDNEESPSLELSLKRLRGVKDAGITIQDERNVLRRSDLSAFSRYNSASNAKKSPAGCAGSNSPHNNSLEFTKKDSSRDIQSHSSDNPPNQNSNGASNNNDMGSTTDNAFTKSAVISKPTVASPTKCLYQSSAFQPIKNNLICASQQVAVHNTEEMTASTMLAPPGGGTNKDSPTQDFHGLYKNHGCIANNMQCQVPPDHDDASSKKMAAAAPHCGSSNVVEMLVEGNVGNYSINRSVSGSNNGSNGQNGSSTAVNAGGINLESNNGIAGNSGSGDASGSGSANRIDPKKSSQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRFRGQFVRQTSNENTSEATEPTDS 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3280 778 MobiDBLite consensus disorder prediction 420 435 - -
Sto13g3280 778 ProSiteProfiles CCT domain profile. 721 763 IPR010402 GO:0005515
Sto13g3280 778 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE PRR37 35 753 - -
Sto13g3280 778 MobiDBLite consensus disorder prediction 475 497 - -
Sto13g3280 778 PANTHER TWO-COMPONENT RESPONSE REGULATOR 35 753 IPR045279 GO:0009736
Sto13g3280 778 MobiDBLite consensus disorder prediction 758 778 - -
Sto13g3280 778 SUPERFAMILY CheY-like 88 214 IPR011006 -
Sto13g3280 778 MobiDBLite consensus disorder prediction 693 778 - -
Sto13g3280 778 MobiDBLite consensus disorder prediction 693 714 - -
Sto13g3280 778 Gene3D - 89 243 - -
Sto13g3280 778 MobiDBLite consensus disorder prediction 715 730 - -
Sto13g3280 778 MobiDBLite consensus disorder prediction 731 746 - -
Sto13g3280 778 MobiDBLite consensus disorder prediction 245 279 - -
Sto13g3280 778 MobiDBLite consensus disorder prediction 509 534 - -
Sto13g3280 778 CDD psREC_PRR 92 195 - -
Sto13g3280 778 MobiDBLite consensus disorder prediction 214 287 - -
Sto13g3280 778 MobiDBLite consensus disorder prediction 230 244 - -
Sto13g3280 778 MobiDBLite consensus disorder prediction 475 534 - -
Sto13g3280 778 MobiDBLite consensus disorder prediction 400 435 - -
Sto13g3280 778 SMART REC_2 90 205 IPR001789 GO:0000160
Sto13g3280 778 Pfam CCT motif 721 763 IPR010402 GO:0005515
Sto13g3280 778 ProSiteProfiles Response regulatory domain profile. 91 209 IPR001789 GO:0000160
Sto13g3280 778 Pfam Response regulator receiver domain 92 203 IPR001789 GO:0000160
Sto13g3280 778 MobiDBLite consensus disorder prediction 214 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3280 Sto-Chr13 36468350 36474105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3280 166 765 Response Regulator Gene Family AT5G02810 48.636 8.50e-129 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Sto13g3280 Response_reg 7.3e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3280 K12129 - gmx:100796933 1063.91