Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3265 ATGTACGGAACTCCGGCTGGGAGGCATTTAATTAGATATGGAGACTCGGATCCAAGTTGCTTAATGGATATACTCGGCATTTATTTTCCCCAGCAGCTATTTACGGTCGAACAAAGTTGGCTCGACCTCACATCTGCTctagtttctttcttttcttctccatCGGGACAAAACCTAGTTTCTCAGGTGAAAAATGATTGTAGCAGTTTTTTCTTGTCAATTGACTTCCAACAGTTCAGAAAAATATGTCATGTTGAGGAATTATATGAAATGTTAGATGGGAAACCTAAAATAGCTCTCTCGTGTATGAGCGCTGCAGTTCACAAGGTTCTTATTTTCAATTGGGAGAATGACAAACTGGAGGATGGTGCAAAAGTACACATCCGTTTGTATAACTGTCCAGAAACTATGATTGCTCTGAAAAACTTGAAAGCAGCATATATTGACAAACTTGTCTCAGTGCGTGGAACTATCGTGAAAGCCAGCACTGTCAGGCCTCTTGTGGTAGAAATGAGTTTTGAATGCGGAAAGTGCAAAGAAAGAATTAGGCGTATATTTCCCGATGGAAAATTTTCGCCTCCATCAATTTGCAATTTGAATGGCTGCAAGAGCAAAATCTTTAATCTATTGCGATCCACTGCTCAAGCTAtagattttcaaaaaataagGCTGCAAGAGCTACTAAAACCTGAAGACCATGAAGAAGGACGGGTGCCTCGAACAGTGGAATGTGAGCTCACTCAAGATCTTGTTGATGCATGTATACCTGGAGATGTAGTGACTGTTACTGGAATTATAAGAGGAATTAACACTTACATGGATATTGGAGGAGGGAAGTCAAAGAGCAAAAACCAAGGATTTTACTATCTGTATCTCGAAGCTGTTTCCATACAAAATTCCAAGTCACAGTCTCTAACCGAGGAGTCGGAAGACTCTAATCCCAAAGCAAGACCAGCTGAGCTGCTTGatttgttttcattttcttcCAGGGATCTAGAATTTATTGTAAAATTCTCACAGGAGCATGGTTCAGATTTGTTTCGGCAAGTACTTCAATCTATATGCCCATCAATCTATGGGCATGAGCTTGTTAAAGCTGGGATAACACTGGCATTATTTGGTGGCGTACGGAAGCATTCTATGGATCAGAATAAGGTTCCTGTGAGGGGAGACATCCATGTCATAATTGTTGGTGATCCTGGACTAGGTAAGAGCCAATTGCTGCAAGCAGCAGCAGCCGTTTCTCCACGTGGTATTTATGTCTGTGGCAATGCCACAACCAAAGCCGGCCTCACAGTAGCTGTAGTAAAGGATCCTATGACAAGTGACTATGCTTTTGAGGCTGGTGCAATGGTGCTGGCTGACAGTGGACTGTGCTGTATTgatgaatttgataaaatgtcAGCCGAACATCAGGCTTTACTAGAGGCAATGGAACAGCAGTGCGTCTCTATTGCAAAGGCAGGATTGGTAGCAAGTTTATCAGCTCGAACTTCAGTCTTAGCAGCAGCAAATCCAGTTGGTGGTCACTATAACCGTGCAAAGACTGTGAATGAAAACTTAAAAATGAGCGCCGCTCTGCTGTCTCGATTTGATTTAGTTTTCATATTGCTGGACAAACCTGATGAACTTCTGGACAAGCGAGTCTCCGAGCACATTATGTCACTTCATGCTGGGTATGGACAACACTCACCGGCAGTTAATAAGCATCGTGGAGGTCTGCCTTCTGACTCAAGAATTGTGGTAACACAGAATGCTGAAGTTGTGGATTTGGGTGTTCGATCTGGATCTTTAGTTTCAAAGTTGAGACTTGACCCGAAAAGAGATGGCGATTTTGTTCCATTGCCTATTCAACTTCTTCGCAAATACATTACTTATGCAAGGAGTTTTGTCTTTCCTAGGATGTCCAAGCCAGCAGCAGAAATCTTACAAAAGTTTTACCTTAAACTGAGAGATCATAACACTTCAGCTGATGGTACACCGATAACAGCCAGGCAACTAGAAAGTCTAGTGAGACTGGCTGAAGCTCGAGCTCGGCTAGACTTGAGAGAAGAAATAACGGCCCAGGATGCGATGGATGTTGTTGAAATAATGAAAGAATCCCTGTATGATAAATACGTTGATGAACATGGGTTTGTGGATTTTGGTCGAAGTGGAGGGATGAGTCAACAGAAAGAGGCGAAACGCTTCCTAAGTGCGCTCAATAAACAATCAGAATTGCAGCAGAAAGACTGCTTTTCAATATCTGAAATATATAGTCTGGCAGATAGGATTGGTCTAAAAGTTCCTGATATTGACACTTTCATCGATAACTTAAACAGCGTTGGCTATCTACTCAAAAAGGGACCAAAGACATATCAGGTGTTATCCTCCTCATATACACGAAGCCAATCATCTAGGATCAAGGGCTAA 2412 0.4113 MYGTPAGRHLIRYGDSDPSCLMDILGIYFPQQLFTVEQSWLDLTSALVSFFSSPSGQNLVSQVKNDCSSFFLSIDFQQFRKICHVEELYEMLDGKPKIALSCMSAAVHKVLIFNWENDKLEDGAKVHIRLYNCPETMIALKNLKAAYIDKLVSVRGTIVKASTVRPLVVEMSFECGKCKERIRRIFPDGKFSPPSICNLNGCKSKIFNLLRSTAQAIDFQKIRLQELLKPEDHEEGRVPRTVECELTQDLVDACIPGDVVTVTGIIRGINTYMDIGGGKSKSKNQGFYYLYLEAVSIQNSKSQSLTEESEDSNPKARPAELLDLFSFSSRDLEFIVKFSQEHGSDLFRQVLQSICPSIYGHELVKAGITLALFGGVRKHSMDQNKVPVRGDIHVIIVGDPGLGKSQLLQAAAAVSPRGIYVCGNATTKAGLTVAVVKDPMTSDYAFEAGAMVLADSGLCCIDEFDKMSAEHQALLEAMEQQCVSIAKAGLVASLSARTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLVFILLDKPDELLDKRVSEHIMSLHAGYGQHSPAVNKHRGGLPSDSRIVVTQNAEVVDLGVRSGSLVSKLRLDPKRDGDFVPLPIQLLRKYITYARSFVFPRMSKPAAEILQKFYLKLRDHNTSADGTPITARQLESLVRLAEARARLDLREEITAQDAMDVVEIMKESLYDKYVDEHGFVDFGRSGGMSQQKEAKRFLSALNKQSELQQKDCFSISEIYSLADRIGLKVPDIDTFIDNLNSVGYLLKKGPKTYQVLSSSYTRSQSSRIKG 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3265 803 Pfam MCM P-loop domain 343 557 IPR001208 GO:0003677|GO:0005524|GO:0032508
Sto13g3265 803 PRINTS Mini-chromosome maintenance (MCM) protein family signature 389 404 IPR001208 GO:0003677|GO:0005524|GO:0032508
Sto13g3265 803 PRINTS Mini-chromosome maintenance (MCM) protein family signature 449 463 IPR001208 GO:0003677|GO:0005524|GO:0032508
Sto13g3265 803 PRINTS Mini-chromosome maintenance (MCM) protein family signature 476 489 IPR001208 GO:0003677|GO:0005524|GO:0032508
Sto13g3265 803 PRINTS Mini-chromosome maintenance (MCM) protein family signature 500 512 IPR001208 GO:0003677|GO:0005524|GO:0032508
Sto13g3265 803 PRINTS Mini-chromosome maintenance (MCM) protein family signature 527 535 IPR001208 GO:0003677|GO:0005524|GO:0032508
Sto13g3265 803 SUPERFAMILY Nucleic acid-binding proteins 68 270 IPR012340 -
Sto13g3265 803 ProSiteProfiles MCM family domain profile. 346 553 IPR001208 GO:0003677|GO:0005524|GO:0032508
Sto13g3265 803 SMART mcm 136 703 IPR031327 GO:0003677|GO:0005524|GO:0032508
Sto13g3265 803 PANTHER DNA HELICASE MCM8 21 798 - -
Sto13g3265 803 SMART AAA_5 390 542 IPR003593 -
Sto13g3265 803 CDD MCM8 350 701 - -
Sto13g3265 803 Gene3D - 324 711 IPR027417 -
Sto13g3265 803 Coils Coil 461 481 - -
Sto13g3265 803 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 21 798 IPR031327 GO:0003677|GO:0005524|GO:0032508
Sto13g3265 803 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 356 708 IPR027417 -
Sto13g3265 803 Gene3D - 167 217 - -
Sto13g3265 803 Pfam MCM OB domain 140 268 IPR033762 -
Sto13g3265 803 Gene3D - 140 269 IPR012340 -
Sto13g3265 803 Pfam MCM AAA-lid domain 619 702 IPR041562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3265 Sto-Chr13 36396832 36403064 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3265 24 789 Core DNA Replication Machinery Family AT3G09660 73.047 0.0 1159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3265 K10737 - gmx:100784549 1323.15