Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3260 ATGGGGAGGAAGGGAAATTGGTTTTCCTCTGTGAAGAAAGCTCTCAGCCCTGAGTCAAAGAAGAGGGAAGAAGACCAGAAACCAAATAAATCAAAGAAGAAATGGTTTGGGAAGCAAAAATTACAACAGACTTCTGACTCATACTTGGAAACTGATAAAGCTCCACCTCTTCCTCCACCAGAAGAGCCTATATTAACTAATATCGAGAACGAAAACAATCATGTTCATGTTGTTGAAGTTGCAACTGTTTCAGATACTAAGGAACCTCTTCCTGCTGTTCACACACCACCTGTTCCTGTTCTAGCTCCTATAATTCCTCGGGTTTCTGGTAAATTAAATGCGGAAGTGGCAGCTATTAAGATTCAAACAGCTTTTCGAGGATACTTGGCCAGAAGGGCATTGCGGGCATTAAGAGGACTGGATAGGTTGAAATCTCTGATGGAAGGGCCAGTAGTAAAACGTCAAGCTGCTAGTACTCTTCGATCTATGCAGACTTTATCTCGCCTGCAATCACAGATTCATACAAGGAGGATTAAGATGCTAGAGGAGAATCAGGCTATTCAGAGACAGTTCTTACAAAAGCATGCAAAGGAGGTTAGCATGCAGCAGATGGGAGATGAGTGGGATGACAGCTTACAATcaaaagaacaaattgaagcCAAGTTACTGGGCAAGTATGAGGCCACTGTGAGAAGAGAAAGAGCAATGGCTTATGCATTCTCTCACCAGAAAAATGGGAAGAATTCATCTAGATCTATAAACCCTGTATTCATGGATCCAACGAATCCAGCATGGGGTTGGAGCTGGCTGGAGCGGTGGATGGCAGCCCGGCCATGGGAGAGCAAAGAGGCAAATGACCAATCGTCTGTCAAAAGCTCAAGCCGCAGCATCTCAGCCGGAGAAATCACTAAATCCTTTGCTCGTTACCAAATCAATTCCGAAAAGCTTTCTCCTACAGCCAGCCAAAACCCTGGCTCTCCTAGCTTCCACTCCCACTCAACTCCTTCCAAGCCACCCGCTTCTTCTTCTGCATCAGCTTCCAAGAAACTGAAGAAGGTGAGCCCCAAGGATACCTTTGTTATTGATGATGACTCTAAAAGCATGGTCAGCGTGCAGTCCGGGTTTCGAAGGCACTCCATCGCCGGATCATCGGTGAGAGATGACGAGAGCCTAGCAAGCTCCCCTGCAGTTCCAAGTTACATGGTACCGACGCAGTCTGCAAAAGCCAAGTCCAGGACACAGAGTCCATTAGTTATAGAGAACAATGGAACAATAGAGAAAGGCTCTTCTGGGACAGCAAAGAAACGgctttctttcccttcttcaccGGCGAGCCGGCCAAGACGACATTCGGGCCCACCAAAAGTAGAAAGCAGCTTCAGTGCAGAGGTCACTGTGGGTAATGGTGTGGCTGGTTGA 1419 0.4545 MGRKGNWFSSVKKALSPESKKREEDQKPNKSKKKWFGKQKLQQTSDSYLETDKAPPLPPPEEPILTNIENENNHVHVVEVATVSDTKEPLPAVHTPPVPVLAPIIPRVSGKLNAEVAAIKIQTAFRGYLARRALRALRGLDRLKSLMEGPVVKRQAASTLRSMQTLSRLQSQIHTRRIKMLEENQAIQRQFLQKHAKEVSMQQMGDEWDDSLQSKEQIEAKLLGKYEATVRRERAMAYAFSHQKNGKNSSRSINPVFMDPTNPAWGWSWLERWMAARPWESKEANDQSSVKSSSRSISAGEITKSFARYQINSEKLSPTASQNPGSPSFHSHSTPSKPPASSSASASKKLKKVSPKDTFVIDDDSKSMVSVQSGFRRHSIAGSSVRDDESLASSPAVPSYMVPTQSAKAKSRTQSPLVIENNGTIEKGSSGTAKKRLSFPSSPASRPRRHSGPPKVESSFSAEVTVGNGVAG 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3260 472 MobiDBLite consensus disorder prediction 1 62 - -
Sto13g3260 472 Gene3D - 38 140 - -
Sto13g3260 472 MobiDBLite consensus disorder prediction 316 355 - -
Sto13g3260 472 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 467 - -
Sto13g3260 472 Pfam IQ calmodulin-binding motif 117 135 IPR000048 GO:0005515
Sto13g3260 472 MobiDBLite consensus disorder prediction 380 472 - -
Sto13g3260 472 SMART iq_5 113 135 IPR000048 GO:0005515
Sto13g3260 472 MobiDBLite consensus disorder prediction 397 439 - -
Sto13g3260 472 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Sto13g3260 472 PANTHER IQ-DOMAIN 5-RELATED 1 467 - -
Sto13g3260 472 MobiDBLite consensus disorder prediction 316 349 - -
Sto13g3260 472 MobiDBLite consensus disorder prediction 15 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3260 Sto-Chr13 36366470 36369318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3260 1 471 IQD Protein Family AT5G03040 50.713 2.30e-138 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3260 - - gmx:100800080 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0867 8 5504027 5506765 Sto13g3260 13 36366470 36369318 CCT
Sto13g3260 13 36366470 36369318 Sto13g3260 13 36366470 36369318 ECH