Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3252 ATGGAGGGTGAGTTCGAGTTTCCCGGCGATGTTCCTCCTTCTTTCGATCGCGTGGGAGATGTGATTAAGAAATCTGAAGGCCAAGGGTTCAACCCAGCGTTAATAGTTCTCTTGCTTGTTGGTGGGCTACTATTGACATTCCTCATCGGAAATTATGTACTTTACACGTATGCACAGAAGACCATCCCTCCTAGAAAGAAGAAGCCAGTCTCCAAGAAAAAGATGAAAAGGGAGAGACTGAAGCAAGGCATCTCTGCACCTGGAGAGTAG 270 0.4667 MEGEFEFPGDVPPSFDRVGDVIKKSEGQGFNPALIVLLLVGGLLLTFLIGNYVLYTYAQKTIPPRKKKPVSKKKMKRERLKQGISAPGE 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3252 89 Pfam DNA binding protein S1FA 25 89 IPR006779 GO:0003677|GO:0005634|GO:0006355
Sto13g3252 89 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 4 89 - -
Sto13g3252 89 MobiDBLite consensus disorder prediction 63 89 - -
Sto13g3252 89 PANTHER DNA-BINDING PROTEIN S1FA2 4 89 IPR006779 GO:0003677|GO:0005634|GO:0006355
Sto13g3252 89 MobiDBLite consensus disorder prediction 65 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3252 Sto-Chr13 36324121 36325611 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Sto13g3252 S1FA 5.6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3252 - - gmx:100499820 130.568