Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3251 ATGTTGGTACTTTCCTTCACATTTTGGAGTCccatcattatcacttttaCATTCTCCCTCTGCTTTTTCCACACTCTCTTCCTTACTTTCGCAGCCGCCACTCAATTCGACTTCGGTACCTTAACTTTAAGCACTCTCAAGCTCCTCGGCGATGCCCACTTGAACAATGCCACCGTAAGTCTCACTCGGGACCTCGCCGTCCCCAACTCCGGCGCCGGCAGAGCTCTCTACTCCAAACCCATCAGGTTCCGCCAACCCGGCACTCACCTTCCGGCCAGTTTCAAGacattcttctccttctccgtCACAAATCTCAATCCCTCATCCATCGGTGGCGGACTCGCTTTCCTCATCACGCCCGACGATGAGACTCTCGGCGACGCCGGTGGCTTCCTCGGCCTCGTCAACGCGGAGGCCAGTGCCCCCTCGGGCTTTCTGGCGGTTGAGTTCGACACACTGATGGACGTAGAGTTCAAGGACGTTAACGGAAATCATGTGGGTTTGGACCTAAATAGTATGGTTTCAACGGAAGTAGGTGATTTGGGATCCATTGATATCGATCTCAAAAGCGGCAACCTCGTCAACGCATGGATCGAGTACGACGGCTCAACCAAGGGGTTTAATATCTGGATTTCGTactcaaatctgaaaccccccGACCCTCTTTTGTCATTCAATCTTGATCTAGATCAGTACGTCAATGACTTCATGTACGTGGGTTTCTCTGCTTCTACACAGGGGAGTACGGAAATTCACAGTGTCGAGTGGTGGAGCTTCACCTCGTCCTTTGACTCCCCTTCATCGGAGGCGGCGGCGCCGCCACCTCCAACTGTCACTCTGATGAACCCAACCGCCAATTCCGTTGTGTCGCCGCCTCCATCGCTAGCTCCTTCTTCTAATTCAGCCTCAACCACTCAACAGAAGGACAGTAAATCCTCGTGCCACAATGAGCTCTGCAAGCAAGGTCCCGGCGCCGTCGCAGGCGTTGTCACGGCGGGGGCTTTTGTTCTAGCTTTATTCGCCGGCGCGTTCATCTGGGTGTACTCCAAAAAGGTTAAACACATTAAGAAGTCCGATTCACTCGCATCAGAAATCATCAAAATGCCAAAAGAATTCAGCTATAAGGAGCTCAAAACAGCGACCAAGTGCTTTAACGCCAACAGAATCATCGGTCACGGAGCATTCGGAACGGTGTACAAGGGGGTATTACCAGAGAGCGGCGACATTGTTGCGGTGAAAAGATGCAGCCACAGTAGTCAGGGGAAGAACGAATTCCTCTCGGAATTATCCATAATTGGGAGTCTGAGACATCGGAATCTAGTTCGTCTCCAAGGTTGGTGTCACGAGAAAGGCGAAATTCTGTTAGTCTACGACTTAATGCCCAACGGAAGTCTAGACAAAGCTCTGTTCGAGGCAAGAACCCCACTCCCATGGCCTCAGAGGCGCAAAATTCTGTTCGGCGTGGCCTCCGCCCTCGCCTACTTACATCAAGAATGCGAGAATCAGGTAATTCACAGAGACGTCAAGACCAGTAATATAATGTTAGACGAAGGGTTCAATGCTCGATTAGGCGACTTCGGGTTAGCGAGACAAACGGAACACGACAAGTCACCGGACGCGACGATGCTGGTGGGGGAGGCTCAAGTACCCATTGTTCCAACCACCAAGCCTAGCTCTAGTTTTAGCACTTCCCAACTCTTGATGTGCTTGCAAGATAGTGTTTCTGACTTTAATGCCTTCATCAATATCTCCACTTCCTCCTCCTCGTCGGACAACGCCTTCAACGGCGGAGATGTCGTCTGA 1803 0.4992 MLVLSFTFWSPIIITFTFSLCFFHTLFLTFAAATQFDFGTLTLSTLKLLGDAHLNNATVSLTRDLAVPNSGAGRALYSKPIRFRQPGTHLPASFKTFFSFSVTNLNPSSIGGGLAFLITPDDETLGDAGGFLGLVNAEASAPSGFLAVEFDTLMDVEFKDVNGNHVGLDLNSMVSTEVGDLGSIDIDLKSGNLVNAWIEYDGSTKGFNIWISYSNLKPPDPLLSFNLDLDQYVNDFMYVGFSASTQGSTEIHSVEWWSFTSSFDSPSSEAAAPPPPTVTLMNPTANSVVSPPPSLAPSSNSASTTQQKDSKSSCHNELCKQGPGAVAGVVTAGAFVLALFAGAFIWVYSKKVKHIKKSDSLASEIIKMPKEFSYKELKTATKCFNANRIIGHGAFGTVYKGVLPESGDIVAVKRCSHSSQGKNEFLSELSIIGSLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWPQRRKILFGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATMLVGEAQVPIVPTTKPSSSFSTSQLLMCLQDSVSDFNAFINISTSSSSSDNAFNGGDVV 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3251 600 SUPERFAMILY Concanavalin A-like lectins/glucanases 32 274 IPR013320 -
Sto13g3251 600 CDD lectin_legume_LecRK_Arcelin_ConA 50 263 IPR001220 GO:0030246
Sto13g3251 600 Gene3D - 31 273 - -
Sto13g3251 600 SMART serkin_6 384 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3251 600 Gene3D Transferase(Phosphotransferase) domain 1 460 556 - -
Sto13g3251 600 ProSiteProfiles Protein kinase domain profile. 384 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3251 600 MobiDBLite consensus disorder prediction 281 312 - -
Sto13g3251 600 SUPERFAMILY Protein kinase-like (PK-like) 362 540 IPR011009 -
Sto13g3251 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 503 515 IPR008271 GO:0004672|GO:0006468
Sto13g3251 600 PANTHER - 542 594 - -
Sto13g3251 600 PANTHER - 31 541 - -
Sto13g3251 600 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 31 541 - -
Sto13g3251 600 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 542 594 - -
Sto13g3251 600 Pfam Legume lectin domain 34 268 IPR001220 GO:0030246
Sto13g3251 600 Pfam Protein kinase domain 385 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3251 600 ProSitePatterns Protein kinases ATP-binding region signature. 390 413 IPR017441 GO:0005524
Sto13g3251 600 Gene3D Phosphorylase Kinase; domain 1 346 459 - -
Sto13g3251 600 MobiDBLite consensus disorder prediction 268 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3251 Sto-Chr13 36318639 36320759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3251 542 578 Receptor kinase-like Gene Family AT3G53380 62.162 5.90e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sto13g3251 Lectin_legB 5.7e-60 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3251 - - jre:108995658 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3251 13 36318639 36320759 Sto13g3251 13 36318639 36320759 ECH