Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3246 ATGAGCGTCATCGACATTTTAACCAGAGTTGATTCGATCTGTAAGAAGTACGACAAATACGACGTTGACAAGCACAAGGATTCCAACATCTCTGGCGACGATGCATTTGCTCGACTCTATGCCGTTGTCGATTCTGATGTCGAGGCTGCTCTTCAGAAAGCTGAAACTTCTTCCAAGGAGAAGAATAGGGCATCGGCCGTAGCGATCAACGCAGAGCTTCGTCGTACAAAGGCTCGGTTACTGGAGGAGGTCCCCAAGTTACAGAAATTGGCGGTCAAAAAGGTAAAGGGGCTTTCATCAGAAGAATTTGCTGCTCGTAATGATCTGGTTCTTGCATTGCCAGAGAGGATCCAAGCTATCCCAGATGGGACTCCTGCTGCTCCAAGAAAAACTGGAGGATGGGCAGCTTCTGCTTCACGAactgaaattaaatttgattcaGTAATTACAGATGGGCAATTTGACAGTGAATACTTCCAGCAAACTGAGGAATCGAGTCAATTCAGGCAGGAGTATGAAATGCGCAGAATGAAGCAGGATCAAGGTTTAGAAGTGATATCAGAAGGATTGGATACGTTGAAAAACATGGCATATGATATGAATGAGGAAATGGATAGGCAAGTTCCACTGATGGATGAGATTGACGCTAAGGTGGACAAGGCATCTTCTGACCTTAAGAATACAAATGTCAGACTTAAACATACAGTCAATCAGCTTCGATCCAGTCGAAACTTCTGTATTGATATTATTTTGTTGATTATAATTCTTGGAATCGCTGCCTATTTATACAAGTAA 795 0.4239 MSVIDILTRVDSICKKYDKYDVDKHKDSNISGDDAFARLYAVVDSDVEAALQKAETSSKEKNRASAVAINAELRRTKARLLEEVPKLQKLAVKKVKGLSSEEFAARNDLVLALPERIQAIPDGTPAAPRKTGGWAASASRTEIKFDSVITDGQFDSEYFQQTEESSQFRQEYEMRRMKQDQGLEVISEGLDTLKNMAYDMNEEMDRQVPLMDEIDAKVDKASSDLKNTNVRLKHTVNQLRSSRNFCIDIILLIIILGIAAYLYK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3246 264 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 173 235 IPR000727 -
Sto13g3246 264 SMART tSNARE_6 168 235 IPR000727 -
Sto13g3246 264 Gene3D - 173 234 - -
Sto13g3246 264 Coils Coil 70 90 - -
Sto13g3246 264 PANTHER SYNTAXIN 1 263 IPR045242 -
Sto13g3246 264 Pfam SNARE domain 210 259 IPR000727 -
Sto13g3246 264 CDD SNARE_Qc 178 234 - -
Sto13g3246 264 PANTHER SYNTAXIN-73 1 263 - -
Sto13g3246 264 SUPERFAMILY SNARE fusion complex 166 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3246 Sto-Chr13 36287074 36289028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3246 1 263 SNARE and Associated Proteins AT3G09740 75.094 1.24e-149 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3246 K08506 - gmx:100819272 422.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3246 13 36287074 36289028 Sto13g3246 13 36287074 36289028 ECH