Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3245 atggaGAAAGATCCTAGCTTAGGAATTCAACTCCTTCCTGGATTTAGATTCCACCCTTCTGATGAGGAGCTCATAGTTCACTACTTGAGAAAAAAAGTGACTTCATGTCCACTTCCTGCTTCAGTCATAGCAGAAATTGATCTTTATAAGTATAACCCATGGGAGCTCCCAAGCAAGGCATTGTTTGGAGAGGAAGAATGGTTTTTCTTTACTCCTAGGGACAGGAAGTATCCCAATGGAATGAGGCCTAATAGAGTAGCTGGATCAGGTTATTGGAAAGCCACAGGAACTGACAAGCCCATTCTTACATCTTGTGGGATGAAGAGCATTGGAGTGAAGAAAGCCCTCGTGTTCTACAAGGGGCGTGCCCCTAGAGGATCTAAAACAGATTGGATCATGCATGAGTATAGGGTGCACCATTCAGTTATTTTGACTTCTAAGCAAAGAGAGTCTTCTATGAGACTAGATGATTGGGTTTTATGTCGAGTTCGACAAAAAACCAGTGGTACAATTAGAAGCAAATGGGAAGATTCACATGAACATAGTTATGAACCAACAAGCTACTTTCAGCAAATGAATGAGAACCCTAACCAACAAGCTTCTAAGAGTATTCAGCCTTCCATTATTGATAAGGCCTCAAGCATAAGATTTGAATGTAGTGATAATGGAAAAGCATATACTTCAGTGCATGAAGGTAAGCCAATTATAATAGGAGAAGAGGTCTTAGAATCTGCTGCTGAAAGCATGTTTAATAATCCACTGAAGAGGAAACCCATTGAAGAAAACCAGCTGGACTTTTATTATGCTCCTCCCTGTAAACAGCCAAGAGAGTATGAGATAGATGTAAGCAAAAGCTGCAATTTCAACTACTTTGATCAGTGGACTTCCATAATTATACAACCTCAGGAGCTGAACAACTTGGCCTTTGCAAAATATATATGA 942 0.3992 MEKDPSLGIQLLPGFRFHPSDEELIVHYLRKKVTSCPLPASVIAEIDLYKYNPWELPSKALFGEEEWFFFTPRDRKYPNGMRPNRVAGSGYWKATGTDKPILTSCGMKSIGVKKALVFYKGRAPRGSKTDWIMHEYRVHHSVILTSKQRESSMRLDDWVLCRVRQKTSGTIRSKWEDSHEHSYEPTSYFQQMNENPNQQASKSIQPSIIDKASSIRFECSDNGKAYTSVHEGKPIIIGEEVLESAAESMFNNPLKRKPIEENQLDFYYAPPCKQPREYEIDVSKSCNFNYFDQWTSIIIQPQELNNLAFAKYI 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3245 313 Pfam No apical meristem (NAM) protein 13 138 IPR003441 GO:0003677|GO:0006355
Sto13g3245 313 Gene3D NAC domain 20 170 IPR036093 GO:0003677|GO:0006355
Sto13g3245 313 PANTHER NAC TRANSCRIPTION FACTOR 56 1 197 - -
Sto13g3245 313 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 197 - -
Sto13g3245 313 ProSiteProfiles NAC domain profile. 11 166 IPR003441 GO:0003677|GO:0006355
Sto13g3245 313 SUPERFAMILY NAC domain 9 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3245 Sto-Chr13 36283676 36284829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3245 10 168 NAC Transcription Factor Family AT1G61110 66.867 6.42e-79 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto13g3245 NAM 1.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3245 - - gmx:100788799 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3245 13 36283676 36284829 Sto13g3245 13 36283676 36284829 ECH