Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3244 atgATGTCGTCTGGTTCTGCTCATCACCACCCTTTCTCCTTATCTTCTTCCATCCAAGGCTTTGCTCCAcaacaaaaccctaaccctaaacccaatcccaagaagaagagaaatctACCAGGAACACcagAACCTTCAGCTTCACCGAAGGGGTCACAACCTGCCATGGAAGCTAAGGCAAAGGTCGAACAAAGAGGTGGTGAGGAAGAAGAAAACACGGGGAGAAGAAATGGAAGTGTGACAAATGTTCCAAGAAATACGCTGTTCAATCTGACTGGAAAGCCCACACCAAGACCTGTGGCACCAGAGAATACAAGTGCGATTGTGGACAGCTTCATCACGCACAGGGCTTTCTGCGATGCCTTAGCGGAAGAGAGTGCCAGACTCACCTCCGTGCCTAGTGCCAATTTGGgagttgaaaataataataatgtggaGGTGATTTCGCAGTTTGGTCCTTCACATTCACATTCAGTGTCAGATGTGTATAATGGAATGGGGATGGGTGTGGAGCAGCAACAGCAAGGGGCAAGTTTGTCATTGTGGTTGAAGCAGCAGGGTGTGGGAGTGGGACTAAACTCTGGTGTTtacgtttcttcttcttcaggatTGGCTGACCATATGGTTGTACAAATGCAAATGTCCCAACCCACTACTACTAGTAATAATGGTTTTGGAATGGGTGATGCTGCTTCAAATTCAACAACACACGCAAGCGCAAGCCTCTCAATTTCAAATAACTCATCAGCTTCTCCCATGTCGGCTACTGCACTTCTCCAGAAGGCTGCTCAAATGGGTTCCACAACAAGTACTACCAACAACAGCATTTTCAGCGCCACTTTTGGAGTCATCACCTCCTCTGCTGCTACTAATCTCAATCATCATAATTATAACTTTGCCTCCCATGCCCATACATCATCATCAAacgctactactactactactagtcTTGAGCAATTGAAGCTTTTCTCTGCTGCTTCGGAGCATAATTTAACAAGAGATTTTCTGGGTATGGGTGGGGGTGGTGCACCTCCTCCTCCATTTCTTCCCCAAGAGCTAGCCAAGTTTGCTTCCATTGCCTCACCCATGGGTTTGACCCAATTCACTACTGCCAATCATTAG 1122 0.4225 MMSSGSAHHHPFSLSSSIQGFAPQQNPNPKPNPKKKRNLPGTPEPSASPKGSQPAMEAKAKVEQRGGEEEENTGRRNGSVTNVPRNTLFNLTGKPTPRPVAPENTSAIVDSFITHRAFCDALAEESARLTSVPSANLGVENNNNVEVISQFGPSHSHSVSDVYNGMGMGVEQQQQGASLSLWLKQQGVGVGLNSGVYVSSSSGLADHMVVQMQMSQPTTTSNNGFGMGDAASNSTTHASASLSISNNSSASPMSATALLQKAAQMGSTTSTTNNSIFSATFGVITSSAATNLNHHNYNFASHAHTSSSNATTTTTSLEQLKLFSAASEHNLTRDFLGMGGGGAPPPPFLPQELAKFASIASPMGLTQFTTANH 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3244 373 PANTHER ZINC FINGER PROTEIN JACKDAW 110 360 IPR033243 GO:0003700
Sto13g3244 373 PANTHER ZINC FINGER PROTEIN JACKDAW 11 49 IPR033243 GO:0003700
Sto13g3244 373 MobiDBLite consensus disorder prediction 1 25 - -
Sto13g3244 373 MobiDBLite consensus disorder prediction 1 100 - -
Sto13g3244 373 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 11 49 - -
Sto13g3244 373 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 110 360 - -
Sto13g3244 373 MobiDBLite consensus disorder prediction 76 93 - -
Sto13g3244 373 MobiDBLite consensus disorder prediction 61 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3244 Sto-Chr13 36270794 36272283 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3244 110 359 IDZ Gene Family AT5G03150 30.650 3.41e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3244 K25870 - gmx:100789331 141.739