Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3223 ATGCACAACGGTAAAGAATCTGTGTTGACTGCTACTGATAGTAGATGCATTGGTATATATGGGGTTCCAATTCGTCTCCCTCCAGGTACAAGTCCAACTCTATGGCTTCCGACGAATCAAGATCTGTTTCGGGATGATGTTGAAACAGAAATAAAACCAAGCAAAGAAACTCAATTGTCAATACCAGCCTACAAGGTGAAGAGGGTGAAAGAGAGAGAGCTTTCAAGGGTGTTTTCTGAGGACTATGATGCCACGGATAAGTTGATATTGGATCCCAGGGGACCAAGAGTGAATACATGGAACAAAATATTCTTAGTAGCATGTCTGGTCTCTTTATTTGTGGATCCCCTCTTCTTTTACATGCCTGTGGCTAAGCAACACAAGTGCATTGACGTATCCGCTAGCCTGGGAGTGTCCCTCACCATAGTTCGcacattggttgatgcattcTACATTGTTCAGATTTATGTTCGGTTTCAGACTGCTTATGTTGCTCCTTCCTCTCGTGTTTTTGGTAGGGGAGAGCTTATTCTAGACCCTTCAAAGATATCAACCAGGTATCTCCAAAAGGACTTCTGGCTTGATGTTCTGGCTGCTCAACCTCTTCCACAGGTGGTAATATGGGCTGTAATTCCAAATCTAAAGGGGTCACAGATGATTGCTTCAAGGCATATTCTGCGTCTAGTGACCATATTCCAGTACCTATTGAGGTTGTATCTTATCTTCCCTCTATCATCCCAAATCACAAAGGCCAGTGGAGTAATGATGGAAAAGGCCTGGGCTGGGGCAGCATATAATCTCATGCTGTATATGCTGGCAAGTCATGTTTTAGGATCCTGCTGGTATCTCTTATCCATTGAAAGGCAAGACGAGTGTTGGATCAAAGCTTGTGGTGTTGAGTACCCACGGTGCCAGTATGGTTACCTTGAGTGTGCAAGCGTAGGTGATCCTGATAGAGCAGCATGGTTCAGATCAAGCAATGTGTCAAGTCTGTGTGATCAGAACAGTGGTTTTTTTCAGTTTGGAATTTTTGCTGATGCTCTCACTTCCCAAATCACCAGCTCAAACTTCTTCATCAAATACTATTACTGCCTTTGGTGGGGACTCAGGAATCTCAGCTCCTTGGGACAGAATCTCTTAACAAGCACTCGTCTTGCAGAGATAAATTTTGCCATAGTCATTGCAATTCTTGGCTTAGTGCTTTTCGGGCAGCTTATAGGCAATATGCAAATGTACCTGCAATCCACCACAATGAGGCTGGAAGAATGGAGAATAAGAAGGAGAGACACAGAGAGATGGATGCATCACAGACAGCTACCGAGTGAACTGAAGCAAAACGTGCGACGGTACGACCAATTCAGATGGGTAGCCACACGTGGGGTTGACGAGGAAACCATTCTGAGAGAGCTGCCAGGGGATCTGAGACGTGACATCAAACGCCACCTCTGCTTGAACCTAGTTCGACAAGTACCACTATTCGACGAGATGGAGGAGAGGATGCTAGACGCCATATGCGAGAGACTGAAGCCATCACTGTGGACCCCAGGAAGCAGACTAGTCCGCGAAGGAGACCCAGTGACGGAGATGGTGTTCATAGTTCGAGGGCGTCTGGATTCCTACACGACGAACGGTGGGCGAACGGGGTTCTTCAATTCGTGCAGAATCGGAGCAGGTGACTTCTGTGGGGAGGAGCTATTACCATGGGTTCTGGACCCTCGTCCTAATATGGTGCTTCCTTCATCGACTCGCACGGTGAAAGCCATAACACAAGTGGAAGCATTTGCGCTGAGAGCAGAGGATTTGCAATTCGTGGCACAACAATTCCGGAGGTTGCATAGTAAACAGCTGAGGCACACATTTAGGTTCTATTCGCAGCAATGGAGGACGTGGGCTGCTTGCTTTATACAAGCAGCTTGGTTTACATATAAGAAAAGAAGAGACGCCAGTGAGCTCGACAAGAAGCAGAACAAGTGTCCAATGATGACATCCACTACTACTGATGCTGCTGCTTCCATGCAATATTTCTCTGCGCCTCTCAACCCACGTTTGGGTTTGGGCTCCAATAATCTCACTGCTTATCCCAAAAGAGGTGGGAGTTTGCGATATGCTTCTGAACTTCACATTCTTGGTTCTTTGAGGAAGCCTGTTGAACCAGACTTTTCCGTGCAAGATATGTAG 2178 0.4601 MHNGKESVLTATDSRCIGIYGVPIRLPPGTSPTLWLPTNQDLFRDDVETEIKPSKETQLSIPAYKVKRVKERELSRVFSEDYDATDKLILDPRGPRVNTWNKIFLVACLVSLFVDPLFFYMPVAKQHKCIDVSASLGVSLTIVRTLVDAFYIVQIYVRFQTAYVAPSSRVFGRGELILDPSKISTRYLQKDFWLDVLAAQPLPQVVIWAVIPNLKGSQMIASRHILRLVTIFQYLLRLYLIFPLSSQITKASGVMMEKAWAGAAYNLMLYMLASHVLGSCWYLLSIERQDECWIKACGVEYPRCQYGYLECASVGDPDRAAWFRSSNVSSLCDQNSGFFQFGIFADALTSQITSSNFFIKYYYCLWWGLRNLSSLGQNLLTSTRLAEINFAIVIAILGLVLFGQLIGNMQMYLQSTTMRLEEWRIRRRDTERWMHHRQLPSELKQNVRRYDQFRWVATRGVDEETILRELPGDLRRDIKRHLCLNLVRQVPLFDEMEERMLDAICERLKPSLWTPGSRLVREGDPVTEMVFIVRGRLDSYTTNGGRTGFFNSCRIGAGDFCGEELLPWVLDPRPNMVLPSSTRTVKAITQVEAFALRAEDLQFVAQQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWFTYKKRRDASELDKKQNKCPMMTSTTTDAAASMQYFSAPLNPRLGLGSNNLTAYPKRGGSLRYASELHILGSLRKPVEPDFSVQDM 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3223 725 ProSiteProfiles cAMP/cGMP binding motif profile. 492 577 IPR000595 -
Sto13g3223 725 Gene3D Helix hairpin bin 419 483 - -
Sto13g3223 725 SUPERFAMILY Voltage-gated potassium channels 91 414 - -
Sto13g3223 725 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 54 722 - -
Sto13g3223 725 Gene3D - 102 416 - -
Sto13g3223 725 CDD CAP_ED 492 623 IPR000595 -
Sto13g3223 725 PRINTS EAG/ELK/ERG potassium channel family signature 144 154 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto13g3223 725 PRINTS EAG/ELK/ERG potassium channel family signature 155 164 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto13g3223 725 PRINTS EAG/ELK/ERG potassium channel family signature 272 282 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto13g3223 725 PRINTS EAG/ELK/ERG potassium channel family signature 361 378 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto13g3223 725 PRINTS EAG/ELK/ERG potassium channel family signature 387 398 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto13g3223 725 PRINTS EAG/ELK/ERG potassium channel family signature 405 414 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto13g3223 725 PRINTS EAG/ELK/ERG potassium channel family signature 455 462 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto13g3223 725 Gene3D Jelly Rolls 490 610 IPR014710 -
Sto13g3223 725 Pfam Cyclic nucleotide-binding domain 513 607 IPR000595 -
Sto13g3223 725 Pfam Ion transport protein 99 419 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Sto13g3223 725 SMART cnmp_10 492 623 IPR000595 -
Sto13g3223 725 PANTHER PROTEIN CNGC15A 54 722 - -
Sto13g3223 725 SUPERFAMILY cAMP-binding domain-like 422 614 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3223 Sto-Chr13 36179996 36183479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3223 65 723 Ion Channels AT2G28260 63.733 0.0 878
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3223 K05391 - gmx:100815543 1036.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3223 13 36179996 36183479 Sto13g3223 13 36179996 36183479 ECH