Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3212 ATGTTAACGGACAATGATGCTATGCTACGGTTATTCACCAGTGCGGAGATAATTTCGTCATCTCAGTTTATGAGTGTCTTCTGTCTGCTTCCGCGGATTCAATGTGCGGACAAGGATACTAGTAACCCCACTGTGCTCCCAATAGTAACGCAGAACATCTATGAACGACTTACAAATGTTACTAGAGCTTTAACCAAGGATATCAAGGATAATTTGGGCTTCTGCGTAAAGAATGTGGATGAAGATTGGAATACGGCATTCAATTTTACGGGCAAATTGGATTTCTTGACTGCTTGCATCAAACTCATCAAAGGAGATCTCACGACTCGACTATGTAGCACAGCTGAAATAAGGTTCTTCTTTGATCGCTTCCGTAATCAGACATCGGCTAAATACCTAAAACCTAACACGAATTGTAACTTGACCTCATGGGTAGAAGGTTGTGAACCTGGGTGGGGTTGTAGTGTAGGCAACAATGTTGACCCCAAATATTTAAGGGAGTCACGTGAGATTCCTCAACGAACCAAGGACTGTCAACCTTGTTGTGAAGGATTTTTCTGCCCTCAGGGACTGACTTGCATGATACCTTGCCCACTAGGTTCTTATTGTCCACTTGGAAAACATAACAAAACGACTGGATTATGTGACCCataTCGTTACCAGTTACCCGCAGGAAAACCAAATCATTCTTGTGGTAGTGCTGATATTTGGACTAGCGTTAACAACAATAGTGATATCTTCTGTTCTCCAGGATCATACTGCCCAACCACGACTAGTAAAGTTCCTTGCAGTAAGGGAATGTTCTCCAATTTCAGACATTACTGCTGGACGGGTTCCTTGCTTCAAAAGCCATGCTTCAAGTTGAGTACCTGTAATCCAAACACAGCAAACCAAGATATTCATGCTTACGGGGCTTTGCTTCTTGTTGCATTGAGTGCTCTCTTGCTCATCATTTATAACTGTTCTGATCAAGTTCTGGCTACTCGAGAAAGAAGGCAGGCTAAAAAAAGGGAAGCTGCAGCAAGACATGTGAGAGAAACTGTACAAGCTCGTGAAAGGTGGAAATCAGCAAAAGATGTGGCTAAGAAGGGTGCAGTGGGATTACAAGAGTCGTTCTCCCGCACCTTTTCTCGCAGGAAATCTACAAAACAACCAGATCGGTTGAAGATCTTTAGTTCCAAAACTAATACAGGTGACACTCCATTGCCACCAATTACTCCAGGTTCTTCAAATGCTGATTCTAAAGCAAAGAAAAAGGAACCCAGCAACCTTACCAAAATGATGGATTCCATTGAGAATGACCCGGAAAGTAATGAAGGATTTAATATACAAATTGGAAATAAAAATCCTAAAAAGCATACGGCAAAGGATTTACATACTAAGAGTCAAATTTTCAAGTATGCTTATGGTCAGATTGAGAAGGAAAAAGCTATGCAAGAGGCAAACAAGAACTTGACTTTCTCGGGAATAATTTCTATGGCTACTGGAGATGAAATTAGGAAAAGGCCTCCGATTGAGGTAGCTTTCAAAGATATAACTCTCACTCTGAAAGGGAAACACAAACATGTACTGAGATGCGTGTCAGGAAAAATCAGTCCTGGTCGAGTTTCAGCTGTCATGGGTCCCTCAGGAGCCGGGAAAACCACATTTCTTTCTGCCTTGGCTGGAAAAGCAAGAGGTTGCCACGTTTCGGGCTCAATTTTAATCAATGGAAAACATGAATCCATACATTGctataagaaaattattggtTTTGTGCCACAAGATGATATTGTGCATGGCAACTTGACTGTGGAGGAGAATCTTCGTTTCAGTGCAAGATGCAGACTGTCTGCGGACTTGCCAAAACCAGATAAGGTTCTAATTATTGAAAGAGTAATTGAATCGCTGGGCCTTCAGGCAGTGAGGGATTCCATAGTTGGGACGGTAGAGAAGCGGGGTATTTCTGGAGGCCAAAAAAAACGTGTAAACGTAGGGCTAGAGATGGTGATGGAGCCTTCTTTATTAATCTTAGACGAGCCTACAACTGGTCTAGACAGTGCATCTTCTAGTTTACTTCTTAAAGCTCTCCGACGTGAAGCTCTTGAAGGGGTAAACATTTGCATGGTGCTTCACCAACCGAGCTATACGTTATTCAGAATGTTTGATGACATTGTATTCCTAGCCAAAGGTGGCTTTACTGCATACCATGGTCCTGTTAAAAAAGTAGAAGAATACTTTGCCGGCATTGGAATCGTGGTACCAGATCGTGTGAATCCTCCAGACCATTTCATTGACGTCCTGGAAGGTTTAGTAAAACTAGATTCAAGTGTGACTCATCAACAACTTCCTGTGAGATGGATGCTTCATAATGGCTATCCAGTACCACCAGATTTGCTTCATGTTGTGGATGAAATTTCTTCTACATCTTCAGCTTCTTCAAATTCAACCGATGTAAAGAAGGGTACTGATGAACAAACGGATCAATCTTTTGTCGGAGAGTTTTGGCAGGATGTGAAAAGTAACGTTCACTTCCAACGAGACAGTGTAGAGGCTAAATTCTTAAAGGTTAAGGATTTATCTAATCGGATAACTCCTGGCGTAGCCCGGCAATATAGATATTTCTTAGGACGGGTTGGTAAGCAGCGGCTACGAGATGCCCAATCGCAAGTAGTTGACtatcttattttattagttGCTGGTGCTTTGTTAGGGACTCTTACTGAAGCCAACGACGAAACATTTGGTTACCTTGGTTATACATTTACTGTCATTGCTGTGTCTCTACTATGCAAGATTGCAGCTCTAAGATCATTTTCTCTGGATAAATTAGAGTACTGGAGGGAGAGTGCAGCTGGGATCAGCACTCTGGCTCATTTTCTCTCCAAAGATACAATCGATCATTTCAATACAGTCATCAAACCTGTTGTTTATCTGTCCATGTTCTACTTTTTTAGCAACCCAAGGTCAAGCTTTGCAAGTAATTACGTGGTTTTGCTTTGTCTTGTATATTGTGTGACTGGCATGGCTTATGCAATAGCCATTTACTTCCAGGCCGGTCCTGCTCAGCTGTGGGCGGTGCTTCTTCCTGTGGTTATGACTCTCATTGCAAACCAGCCAAGAGATACAACATTTATGAAGATCCTAGTACTCCGGGGTGTGGTTGATAACTCGTTGTGGTTCGCTGATGACGAATGGGTACGACGTCAACGATTGGTCTCTTTGTTTGATTGTGCTGATTTTGAATGGTATAGTTGCCCGAGTTGTGGCCTTCTTTTTTCTGCTTCTCTCCCGAAAGACGTGAATGTGGATATATGCATGAGTATGAGATTTCGACGGTGA 3321 0.4204 MLTDNDAMLRLFTSAEIISSSQFMSVFCLLPRIQCADKDTSNPTVLPIVTQNIYERLTNVTRALTKDIKDNLGFCVKNVDEDWNTAFNFTGKLDFLTACIKLIKGDLTTRLCSTAEIRFFFDRFRNQTSAKYLKPNTNCNLTSWVEGCEPGWGCSVGNNVDPKYLRESREIPQRTKDCQPCCEGFFCPQGLTCMIPCPLGSYCPLGKHNKTTGLCDPYRYQLPAGKPNHSCGSADIWTSVNNNSDIFCSPGSYCPTTTSKVPCSKGMFSNFRHYCWTGSLLQKPCFKLSTCNPNTANQDIHAYGALLLVALSALLLIIYNCSDQVLATRERRQAKKREAAARHVRETVQARERWKSAKDVAKKGAVGLQESFSRTFSRRKSTKQPDRLKIFSSKTNTGDTPLPPITPGSSNADSKAKKKEPSNLTKMMDSIENDPESNEGFNIQIGNKNPKKHTAKDLHTKSQIFKYAYGQIEKEKAMQEANKNLTFSGIISMATGDEIRKRPPIEVAFKDITLTLKGKHKHVLRCVSGKISPGRVSAVMGPSGAGKTTFLSALAGKARGCHVSGSILINGKHESIHCYKKIIGFVPQDDIVHGNLTVEENLRFSARCRLSADLPKPDKVLIIERVIESLGLQAVRDSIVGTVEKRGISGGQKKRVNVGLEMVMEPSLLILDEPTTGLDSASSSLLLKALRREALEGVNICMVLHQPSYTLFRMFDDIVFLAKGGFTAYHGPVKKVEEYFAGIGIVVPDRVNPPDHFIDVLEGLVKLDSSVTHQQLPVRWMLHNGYPVPPDLLHVVDEISSTSSASSNSTDVKKGTDEQTDQSFVGEFWQDVKSNVHFQRDSVEAKFLKVKDLSNRITPGVARQYRYFLGRVGKQRLRDAQSQVVDYLILLVAGALLGTLTEANDETFGYLGYTFTVIAVSLLCKIAALRSFSLDKLEYWRESAAGISTLAHFLSKDTIDHFNTVIKPVVYLSMFYFFSNPRSSFASNYVVLLCLVYCVTGMAYAIAIYFQAGPAQLWAVLLPVVMTLIANQPRDTTFMKILVLRGVVDNSLWFADDEWVRRQRLVSLFDCADFEWYSCPSCGLLFSASLPKDVNVDICMSMRFRR 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3212 1106 CDD ABCG_EPDR 504 731 - -
Sto13g3212 1106 Pfam ABC transporter 526 675 IPR003439 GO:0005524
Sto13g3212 1106 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 507 748 IPR003439 GO:0005524
Sto13g3212 1106 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 42 1043 - -
Sto13g3212 1106 MobiDBLite consensus disorder prediction 374 423 - -
Sto13g3212 1106 SMART AAA_5 533 725 IPR003593 -
Sto13g3212 1106 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 42 1043 - -
Sto13g3212 1106 MobiDBLite consensus disorder prediction 388 412 - -
Sto13g3212 1106 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 504 730 IPR027417 -
Sto13g3212 1106 ProSitePatterns ABC transporters family signature. 648 662 IPR017871 GO:0005524
Sto13g3212 1106 Pfam ABC-2 type transporter 705 1042 IPR043926 GO:0140359
Sto13g3212 1106 Gene3D - 497 742 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3212 Sto-Chr13 36113932 36120513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3212 526 724 Calmodulin-binding Proteins AT2G36910 29.469 5.56e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3212 - - gmx:100812387 1489.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3212 13 36113932 36120513 Sto8g2435 8 16668385 16687267 ECH
Sto13g3212 13 36113932 36120513 Sto10g1121 10 10836243 10847162 ECH
Sto13g3212 13 36113932 36120513 Sto13g3212 13 36113932 36120513 ECH