Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3210 ATGAAGTGTTTTGCTTTCCACTACGGAGACAAGAAGGATGAACCGAAGAGCATTAAGTCAATTTCAGGTCGATCCAATAGTTCCACATATGTTGAGGGTGATATGAGAAGATCTGGCTCTGAATTAAATTCTCAGAATATTTCAGACAATAGCACAGACTCCCTTAGGAGAACTTCGTTTCCCAGTTTGTCCCAAAGACCCAGCAACCTGAGAGTTTTTACAGTTTCTGAACTGAAATCAGCCACTAAAAATTTTGGTCGCTCTGTTATGCTTGGAGAGGGTGGATTTGGCTGTGTCTACAAGGGACTAATCAAGAGCACAGAGGATCCACCCAGAAAAATTGAAGTTGCAGTCAAACAACTTGGTAGAAGAGGAATGCAGGGGCACAAGGAATGGGTGACAGAAGTGAATGTTTTGGGCATTGTTGAGCATCCTAATCTTGTGAAACTAGTGGGCTACTgtgctgatgatgatgaaagaggAATCCAGCGGCTTCTGGTTTATGAATATATGCCCAACAGAAGTGTCGAACACCATTTATCCCCCCGATCAGAGACCCCTCTTTCATGGAGTAAGAGATTGAAAATAGCCCAAGATGCAGCTCGTGGCTTAACATATCTTCACGAAGAAATGGATTTTCAGATAATCTTCAGAGATTTCAAATCTTCAAATATACTTCTGGACGAGCAGTGGAATGCAAAGCTTTCAGACTTTGGGTTAGCAAGATTGGGCCCATCCGAAGGGTTAACTCATGTCTCAACGGCGGTTGTAGGAACAATGGGGTATGCAGCTCCTGAATATATTCAAACCGGACGTCTTACATCAAAAAGTGATGTATGGAGCTATGGTGTCTTCCTTTATGAACTCATCACTGGCCGGCGCCCTCTGGATCGAAATCGTCCTAAGGGTGAGCAGAAGCTCTTGGAATGGGTAAGGCCATACCTATCAGATGTAAAGAAATTTCAACTCATATTAGATCCAAGGCTTGACAGGAAACACTTAATCAAGTCAGCCCAAAGACTAGCTGTTATAGCTAACCGATGCTTGGTTAAAAACCCAAAGAATCGCCCAAAGATGAGCGAGATATTGGAAATGGTGAATCGGATTGTTGAATCTTCAACAGCTGCAAGTCCGCAGCTACCCTTGAAATCGGCTGAAGTTTCCCAAGGCACTGAAACTAAGAAGAAGAGAACGTTTATGGATCTTTTACCTGGAGAAAATAATTGGTTTTTTAGGCTGTGGAGACCAAAGCTTTTAAAAGTATGTTGA 1269 0.4192 MKCFAFHYGDKKDEPKSIKSISGRSNSSTYVEGDMRRSGSELNSQNISDNSTDSLRRTSFPSLSQRPSNLRVFTVSELKSATKNFGRSVMLGEGGFGCVYKGLIKSTEDPPRKIEVAVKQLGRRGMQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLVYEYMPNRSVEHHLSPRSETPLSWSKRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSEGLTHVSTAVVGTMGYAAPEYIQTGRLTSKSDVWSYGVFLYELITGRRPLDRNRPKGEQKLLEWVRPYLSDVKKFQLILDPRLDRKHLIKSAQRLAVIANRCLVKNPKNRPKMSEILEMVNRIVESSTAASPQLPLKSAEVSQGTETKKKRTFMDLLPGENNWFFRLWRPKLLKVC 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3210 422 SUPERFAMILY Protein kinase-like (PK-like) 59 366 IPR011009 -
Sto13g3210 422 Gene3D Phosphorylase Kinase; domain 1 65 170 - -
Sto13g3210 422 CDD STKc_IRAK 91 369 - -
Sto13g3210 422 Pfam Protein kinase domain 89 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3210 422 PANTHER OS01G0588500 PROTEIN-RELATED 12 417 - -
Sto13g3210 422 MobiDBLite consensus disorder prediction 20 63 - -
Sto13g3210 422 Gene3D Transferase(Phosphotransferase) domain 1 171 388 - -
Sto13g3210 422 ProSiteProfiles Protein kinase domain profile. 85 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3210 422 PANTHER KINASE 1B 12 417 - -
Sto13g3210 422 MobiDBLite consensus disorder prediction 8 63 - -
Sto13g3210 422 ProSitePatterns Protein kinases ATP-binding region signature. 91 119 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3210 Sto-Chr13 36108599 36110868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3210 1 363 Glycoside Hydrolase AT3G07070 43.316 4.36e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sto13g3210 Pkinase 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3210 - - gsj:114400704 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3210 13 36108599 36110868 Sto13g3210 13 36108599 36110868 ECH