Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3196 ATGTCACAAGATTCTCAAGAGATAAAGACGATTGAGCAGTGGAGATGGTCGGAAATGCAAGGCCTTGAGCTCGTCTCTCCCGCTCCTTTTTCTGGCCACCCACCTCCACCGGAAAACACTCTCTCCACTCCACCGCACAAAATGGAGACCTCTGAAACCAAGAAAGATAGCGCCGGCGCCGGCGGAGAGAAGCCTGACAATATTCCGGCCGTTGGATTTGGCGAGCTCTTCAGATTCGCCGACGGCTTGGATTACATTCTGATGGGAATTGGAAGCGTGGGAGCAATCGTGCACGGCTGTTCCTTGCCTCTGTTTCTCCGCTTCTTCGCCGATCTCGTGAATTCTTTTGGGGCAAATGCCAATAATCTGGATAAGATGACCCAGGAAGTGGTCAAGTACGCATTTTACTTCCTGGTGGTAGGTGCTGCTATATGGGCATCGTCATGGGCAGAGATATCGTGCTGGATGTGGACGGGGGAGAGGCAATCAACGAAGATGAGGATCAAGTACCTTGAAGCTGCCTTAAACCAGGACATTCAGTACTTTGACACAGAGGTTAGAACATCCGACGTCGTTTTTGCCATCAACACCGATGCCGTGATGGTCCAAGACGCCATTAGCGAGAAGCTTGGTAATTTCATTCACTACATGGCGACTTTTGTTTCTGGATTTGTGGTGGGTTTCACGGCTGTTTGGCAATTAGCTCTCGTTACTCTCGCCGTAGTCCCTATGATTGCTGTAATTGGAGGCATCCACACTACCACCTTGGCCAAGTTCTCTGCCAAAAGCCAGGATGCTCTTTCTAAAGCTGGCAACATCGTCgaacagaCGATCGTGCAAATTCGAGTAGTACTGGCTTTCGTTGGGGAGAGTCGAGCCTTGCAAGAGTACACTTCGGCGCTGAAGGTATCCCAAAAGAATGGCTACAAAAGTGGGTTCGCTAAGGGAATGGGATTGGGCGCCACTTACTTTGTCGTTTTCTGCTGTTATGCGCTCCTACTATGGTACGGAGGTTACCTAGTCAGGCACCACTACACTAATGGAGGTCTTGCCATTTCCACTATGTTTGCTGTTATGATCGGAGGATTGGGTTTGGGGCAATCGGCACCCAGCGTCGCTGCATTTACAAAGGCCAGAGTGGCTGCTGCCAAAATTTTCCGAATCATTGATCACAAGCCGGGGATAGACCGAAGCAGTGATTCGGGTTTGGAATTAGAGTCAGTGACTGGGTTAGTGGAGCTCAGAAATGTAGATTTCTCGTACCCATCCAGGCCAGATGTTCGGATCCTCAATAATTTCTCTTTGAATGTGCCCGCCGGCAAGACCATTGCTTTGGTTGGAAGCAGCGGCTCCGGCAAGAGCACCGTCGTCTCCCTTATCGAGAGATTCTATGACCCAACATCAGGAGAAGTAGTGCTAGATGGACATGACATTAAAACGTTGAAGCTGAGATGGCTGAGGCAGCAAATAGGGCTTGTAAGCCAAGAGCCTGCTTTATTTGCAACGACGATTAGGGAAAATATTCTGTTGGGTAGGCCCGATGCAGATCAGGTTGAGATTGAAGAAGCTGCCAGAGTAGCCAATGCTCATTCCTTTATAATCAAACTTCCCGAAGGCTATGAAACCCAGGTGGGAGAGAGAGGGTTGCAACTTTCAGGAGGACAAAAGCAGAGAATAGCAATAGCAAGGGCAATGCTGAAAAACCCAGCAATTCTACTTCTGGATGAGGCAACAAGTGCTTTAGACTCGGAATCTGAAAAGCTTGTGCAAGAGGCCCTTGACCGATTCATGATTGGTAGAACAACTCTTGTAATTGCCCATCGCCTCTCCACCATTCGCAAAGCTGACCTTGTTGCTGTACTTCAGCAAGGAAGTGTTTCTGAAATTGGAACTCATGATGAGCTCTTTGCCAAGGGCGAAAATGGAGTCTATGCCAAGCTTATCCGGATGCAAGAAATGGCACATGAAACTGCTATGAGTAATGCCAGGAAGAGTAGTGCAAGGCCTTCAAGTGCAAGGAACTCTGTGAGCTCACCAATAATTGCACGGAATTCTTCTTATGGTCGCTCGCCATACTCACGCAGGCTGTCAGACTTTTCCACTTCTGATTTTAGTCTCTCCCTTGATGCTTCACATCCAAATTACAGGCTTGAGAAGCTTGCCTTCAAAGAGCAAGCCAGTTCATTTTGGCGACTTGCGAAAATGAATTCTCCTGAATGGCTTTATGCTTTAATTGGTTCTATAGGATCTGTTGTTTGTGGATCCCTCAGTGCATTCTTTGCTTATGTTCTTAGTGCTGTCCTCAGTGTCTATTACAACCCAGACCATAGATTCATGATTCGAGAAATTGAAAAGTACTGTTACTTGTTGATTGGGCTTTCTTCAGCCGCCCTTCTCTTCAATACATTGCAGCACTTCTTCTGGGATATTGTGGGAGAAAATCTTACAAAACGAGTGCGAGAGAAGATGTTGGCTGCTGTGCTAAAAAATGAAATGGCATGGTTTGaccaagaggaaaatgagagTGCTCGGGTTGCAGCAAGGCTTGCTCTTGATGCCAACAATGTCAGATCAGCAATTGGAGATCGGATTTCAGTCATTGTGCAGAACACTGCACTTATGCTAGTTGCTTGTACTGCAGGGTTTGTTTTGCAGTGGCGCCTCGCGCTTGTCCTTGTAGCTGTGTTTCCCGTTGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGAGACCTGGAAGTTGCTCATGCCAAGGCCACACAACTTGCAGGAGAGGCTATAGCTAATGTAAGAACTGTTGCAGCATTCAactcagaaagaaaaatagttgGTCTTTTCACTTCCAACCTTGAAACTCCACTCCGGCGCTGCTTTTGGAAGGGACAAATTTCTGGAAGTGGATTCGGAATAGCTCAGTTTGCACTTTATGCTTCCTATGCACTTGGTCTTTGGTATGCCTCTTGGCTTGTGAAGCACGGAATCTCTGATTTCTCCAAAACAATTAGAGTCTTCATGGTCCTCATGGTCTCTGCCAATGGTGCTGCTGAAACATTAACCCTTGCTCCTGACTTCATCAAGGGAGGTCGAGCCATGAAGTCAGTCTTCAATCTTCTTGACCGTAGAACTGAAATTGAGCCAGATGATCCAGATGCTACCCCTGTTCCTGATCGCCTTCGCGGAGAAGTTGAGCTTAAGCATGTAGACTTCTCTTATCCCACTCGCCCAGATGTGGCAGTTTTTCGTGACCTGAGTCTTCGTGCAAGGGCAGGTAAAACTCTAGCCCTTGTAGGACCTAGCGGCTGTGGTAAGAGCTCTGTCATTGCACTAGTACAGAGATTCTATGATCCAACATCTGGGCGGGTTATGATCGATGGGAAGGACATAAGAAAATACAATCTCAAGTCCCTTAGAAGGCATATTGCCATTGTACCTCAGGAGCCTTGCTTGTTTGCTTCTACCATATATGAAAACATAGCTTACGGGAATGACTCAGCAACTGAAGCTGAGATAATTGAAGCAGCAACTCTTGCCAATGCCCACAAGTTCATATCTGCTTTGCCAGATGGATACAAAACCTTTGCTGGGGAGAGAGGAGTTCAACTATCTGGAGGACAAAAGCAGAGAATAGCAATTGCTCGAGCTTTTGTGAGGAAGGCAGAGATTATGCTTCTTGATGAAGCCACTAGTGCACTTGATGCTGAATCTGAGAGGTCCGTTCAAGAGGCTCTAGACCGTGCCTGCTCTGGAAAAACTACTATTATAGTTGCTCACAGGCTATCAACTATTAGGAATGCCAATGTGATTGCTGTGATTGATGATGGAAAAGTAGCAGAGCAAGGATCACACTCTCAGTTGTTGAAAAATCACCCTGATGGGATATATGCGCGCATGATTCAATTACAAAGGTTCTCACACACTCAAGTTACTGGAATGACATCTGGTTCAACTTCTTCAAGACCAAAAGATGATGATGACAGAGAAGGTTAG 4002 0.4635 MSQDSQEIKTIEQWRWSEMQGLELVSPAPFSGHPPPPENTLSTPPHKMETSETKKDSAGAGGEKPDNIPAVGFGELFRFADGLDYILMGIGSVGAIVHGCSLPLFLRFFADLVNSFGANANNLDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALNQDIQYFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGGIHTTTLAKFSAKSQDALSKAGNIVEQTIVQIRVVLAFVGESRALQEYTSALKVSQKNGYKSGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHHYTNGGLAISTMFAVMIGGLGLGQSAPSVAAFTKARVAAAKIFRIIDHKPGIDRSSDSGLELESVTGLVELRNVDFSYPSRPDVRILNNFSLNVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGEVVLDGHDIKTLKLRWLRQQIGLVSQEPALFATTIRENILLGRPDADQVEIEEAARVANAHSFIIKLPEGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFAKGENGVYAKLIRMQEMAHETAMSNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDASHPNYRLEKLAFKEQASSFWRLAKMNSPEWLYALIGSIGSVVCGSLSAFFAYVLSAVLSVYYNPDHRFMIREIEKYCYLLIGLSSAALLFNTLQHFFWDIVGENLTKRVREKMLAAVLKNEMAWFDQEENESARVAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGDLEVAHAKATQLAGEAIANVRTVAAFNSERKIVGLFTSNLETPLRRCFWKGQISGSGFGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMKSVFNLLDRRTEIEPDDPDATPVPDRLRGEVELKHVDFSYPTRPDVAVFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYDPTSGRVMIDGKDIRKYNLKSLRRHIAIVPQEPCLFASTIYENIAYGNDSATEAEIIEAATLANAHKFISALPDGYKTFAGERGVQLSGGQKQRIAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIIVAHRLSTIRNANVIAVIDDGKVAEQGSHSQLLKNHPDGIYARMIQLQRFSHTQVTGMTSGSTSSRPKDDDDREG 1333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3196 1333 MobiDBLite consensus disorder prediction 1310 1333 - -
Sto13g3196 1333 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 412 648 IPR003439 GO:0005524
Sto13g3196 1333 Gene3D - 1058 1314 IPR027417 -
Sto13g3196 1333 Pfam ABC transporter transmembrane region 745 1014 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto13g3196 1333 Pfam ABC transporter transmembrane region 90 361 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto13g3196 1333 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 90 377 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto13g3196 1333 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 88 1310 IPR039421 -
Sto13g3196 1333 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1067 1303 IPR003439 GO:0005524
Sto13g3196 1333 CDD ABC_MTABC3_MDL1_MDL2 1067 1306 - -
Sto13g3196 1333 SUPERFAMILY ABC transporter transmembrane region 731 1054 IPR036640 GO:0005524|GO:0016021
Sto13g3196 1333 ProSitePatterns ABC transporters family signature. 551 565 IPR017871 GO:0005524
Sto13g3196 1333 Gene3D ABC transporter type 1, transmembrane domain 135 1040 IPR036640 GO:0005524|GO:0016021
Sto13g3196 1333 Pfam ABC transporter 430 579 IPR003439 GO:0005524
Sto13g3196 1333 Pfam ABC transporter 1086 1234 IPR003439 GO:0005524
Sto13g3196 1333 CDD ABC_MTABC3_MDL1_MDL2 412 651 - -
Sto13g3196 1333 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 744 1031 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto13g3196 1333 MobiDBLite consensus disorder prediction 25 65 - -
Sto13g3196 1333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1058 1306 IPR027417 -
Sto13g3196 1333 SMART AAA_5 439 625 IPR003593 -
Sto13g3196 1333 SMART AAA_5 1094 1286 IPR003593 -
Sto13g3196 1333 CDD ABC_6TM_Pgp_ABCB1_D1_like 88 385 - -
Sto13g3196 1333 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 88 1310 - -
Sto13g3196 1333 CDD ABC_6TM_Pgp_ABCB1_D2_like 733 1049 - -
Sto13g3196 1333 ProSitePatterns ABC transporters family signature. 1206 1220 IPR017871 GO:0005524
Sto13g3196 1333 Gene3D - 410 675 IPR027417 -
Sto13g3196 1333 SUPERFAMILY ABC transporter transmembrane region 76 396 IPR036640 GO:0005524|GO:0016021
Sto13g3196 1333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 403 651 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3196 Sto-Chr13 35997633 36003262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3196 32 1329 Calmodulin-binding Proteins AT2G36910 87.298 0.0 2317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3196 13 35997633 36003262 Sto13g3196 13 35997633 36003262 ECH