Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3194 ATGAGAACGTCAAACGCAAGCTCCGATTTGCCGGCGAACAATGTGAGGCAATCCGACGTGGCGGCGCTTTTGTACTCATCCGGCACGACGGGGAGAAGCAAGGGAGTGATTCTGACGCACCGGAATTTCATATCGGCGTCACTGGCGGGGACGTCAGATCAGGATGGAATGGGCGAAATGAAGAATGTATTCCTGTGTCTCTTGCCGATGTTCCACGTGTTTGGGCTTTCGATCATAACGTATTCGCAGCTGCGGAAGGGGAACACAGTGGTGTTAATGAAGAGGTTCGATTTGGAGAAGGCTCTGGAAGCAGTGGAGAAGTTCAAGGTGACGCACATGTATGTGGTTCCGCCGGTTATGATTGAGCTGGTGAAGCGGAGTGATGCGCTGAACAAGTATGACTTATCGTCACTGAAGCAGATCGCGGGAGGTGCTGCTCCTCTGGGGAGAGATGTAATGCAGGAGTGTGCTCAGATTCTTCCTCAGGTTCAGATTATTCAGGGATATGGCATGACAGAATCCTGTGGAACTGTTTCCTTAGAGAATCCAAAGGAAGGAAGCCGCCTTTCAGGTTATTTTAACAATCCAGAAGGGACAAAGTTGACCATAGATGATCAAGGTTGGGTACATTCAGGAGACCTTGGTTATTTCGATGAAGAGGGACGGCTATTTGTGATTGATCGAATCAAAGAGCTCATCAAGTGTAATGGGTTTCAGGTGGCGCCAGCAGAACTTGAAGACTTGCTGGTTTCTCACCCTGAAATATTAGATGCTTGTGTGATCCCATCCCCTGATGCTAAAGCTGGGGAGGTTCCAGTTGCTTATGTAGTTCGATCACCCAACAGCTTGTTAACGGAAGAAGCCATTCATAAATTTGTAGCAAAACAGGTTGCACCATACAAAAGATTAAGGAGAGTGACTTTTATAGAGAAGGTTCCAAAGTCATTGACAGGAAAGATTTTGAGAAAAGATCTCATAAAAATTGATCGACAAAGAGTACAGACAACGCAACATGCCTCTCAGACATTTATTGCTCTTCCTTCTGCGTTGCTTCGAGCATCATCCATATATCCTCTCCTCTACTACTCTGACGTAATAGTATCGTATAGGTAG 1113 0.4645 MRTSNASSDLPANNVRQSDVAALLYSSGTTGRSKGVILTHRNFISASLAGTSDQDGMGEMKNVFLCLLPMFHVFGLSIITYSQLRKGNTVVLMKRFDLEKALEAVEKFKVTHMYVVPPVMIELVKRSDALNKYDLSSLKQIAGGAAPLGRDVMQECAQILPQVQIIQGYGMTESCGTVSLENPKEGSRLSGYFNNPEGTKLTIDDQGWVHSGDLGYFDEEGRLFVIDRIKELIKCNGFQVAPAELEDLLVSHPEILDACVIPSPDAKAGEVPVAYVVRSPNSLLTEEAIHKFVAKQVAPYKRLRRVTFIEKVPKSLTGKILRKDLIKIDRQRVQTTQHASQTFIALPSALLRASSIYPLLYYSDVIVSYR 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3194 370 Pfam AMP-binding enzyme 11 183 IPR000873 -
Sto13g3194 370 Pfam AMP-binding enzyme 190 235 IPR000873 -
Sto13g3194 370 Gene3D Luciferase; Domain 3 175 228 - -
Sto13g3194 370 Pfam AMP-binding enzyme C-terminal domain 244 319 IPR025110 -
Sto13g3194 370 Gene3D - 5 39 - -
Sto13g3194 370 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 189 329 - -
Sto13g3194 370 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 4 188 - -
Sto13g3194 370 Gene3D - 229 334 IPR045851 -
Sto13g3194 370 SUPERFAMILY Acetyl-CoA synthetase-like 5 332 - -
Sto13g3194 370 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 4 188 - -
Sto13g3194 370 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 189 329 - -
Sto13g3194 370 ProSitePatterns Putative AMP-binding domain signature. 23 34 IPR020845 -
Sto13g3194 370 Gene3D - 40 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3194 Sto-Chr13 35975356 35980251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3194 1 333 Monolignol Biosynthesis Gene Families AT4G05160 57.641 4.65e-151 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3194 K01904 K10526 zju:107411478 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3194 13 35975356 35980251 Sto8g2479 8 17129412 17133483 ECH
Sto13g3194 13 35975356 35980251 Sto13g3194 13 35975356 35980251 ECH