Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3177 ATGGTGGTTGCGGAGTTcaccggcggcggcggcggctgGAGAGAAATGATAAGCTTCGGTCACCGCGTGGTGACGGGACGGTGGTTCACGGTGTTCGCGTCTCTACTCATAATGGCGGTTGCAGGGGCAACCTACATGTTCGGTTTGTATTCCAACGACGTCAAAAGCTCATTAGGCTACGACCAGTCCACTCTCAACCTCCTCAGCTTCTTCAAGGACTTGGGTGCCAATGTGGGAGTGTTATCCGGTTTGATCAACGAGGTCACTCCTCCTTGGGTGGTCCTCTCCATGGGAGCCATCATGAATTTCTTCGGCTACTTCATGATCTGGCTCGCCGTCACTAACCGCATTTCCAAACCCCAAGTCTGGCACATGTGCCTCTACATCTGCATTGGCGCCAACTCTCAGTCCTTCGCCAACACCGGCGCTTTGGTCACGTGCGTTAAGAACTTCCCCGGAAGCCGCGGAAGCCTTCTCGGACTCCTCAAAGGTTACGTTGGTCTCAGCGGCGCTATTCTCACCCAGCTTTACCACGCCTTCTATGGCGACGACTCCAAGTCTCTTATCTTGCTCATCGCTTGGCTTCCCGCCGCTATTTCCTTCATTTTCCTCCCCACTATAAGGATTTTAAACCCAAATAGTAATCCGCAACACAAGGAGCTAAGAGTCTTTTACCATCTTCTTTACATCTCCCTTGGCCTCGCTGCCTTCCTCATGATACTAATCATCGTACAGAACAAGCTTAGCTTCACCAGAGTCGAATACGTGGTGGATGGCTTCGTGGTTCTcttcttgcttcttcttccacttgcCGTGGTTTTCAGAGAGGAATTCCACCTCTGGAGAGCAAGAAAATCACAGGCCTTCACCGACGCTGCTGCTAATTCCGAATTCAAAGTAGTCACTGAGGCTTTACCTCCTCAACCCCTGCCACGTGGAATCTCCGAGAAGGAGCAAACTAGTTCTGATTGTACGAGAAACGTGTTTAAGGCACCAAACAGGGGAGAGGACTACACCATCTTGCAAGCTCTGTTCAGCATCGACATGTGGATTCTGTTCATCGCGACGACGTTCGGCGTGGGAGGGACATTAACGGCGATTGACAATTTAGGACAGATTGGTTCTTCGTTGGGGTACCCGAAGAGGAGTACTACCACGTTTGTGTCGTTAGTGAGCATATGGAATTACCTAGGACGTGCAGTGGCGGGGTTTGTGTCTGAAATCTTCTTGACCAAATACAAATTCCCTCGTCCCTTAATGCTCACGCTGGTGATGCTTGTGTCGTGCGTGGGGCATCTTTTAATTGCCTTCGGTGTCCCTAACTCTCTCTACTTCGCTTCCGTGATTATTGGATTCTGCTTCGGAGCGCAATGGCCGTTGATGTTCGCCATCATATCGGAAATATTCGGACTGAAATACTACTCTACGCTGTACAATCTAGGAGCAGTAGCGAGCCCCGTTGGATCGTACATTCTGAATGTGAAGGTGACGGGGTATTTGTACGACAAGGAGGCTTTGAAACAATTGGAGGGGAAGGGGTTGAGGAGGAAAGCAGGGGAGGACTTGAGTTGCTTGGGAGTTGAATGTTACAAAAGGGCTTTTATTATAATCACTGTTTCCACGCTGATTGGGTGCTTCATTTCTTTCATTCTGGTGGTGAGGACTAGGAAGTTCTATAAAGGTGATATATACAGCAAGTTCAGAGTGGAAGAACAAGCACAGAGTGAGATAGCTGTGGCTATGGCTACTACTACCTCCACGAGTAGTAGTGTTCCGTTAGAGACAGAATGTAAAGCAACTAATGGTGACAGTACTCTCGCCACCACAAGCGGCAGCGTCGCAGTCACAGAGGAACTATgtgatgataaaatcaatagAAAGTTGATCGTCGGAACGCATCTCCGACCGATCATCTGGCCACCCGCATTCCGCTTATCCCACATGGATGATTCGCCATTTTGA 1962 0.4791 MVVAEFTGGGGGWREMISFGHRVVTGRWFTVFASLLIMAVAGATYMFGLYSNDVKSSLGYDQSTLNLLSFFKDLGANVGVLSGLINEVTPPWVVLSMGAIMNFFGYFMIWLAVTNRISKPQVWHMCLYICIGANSQSFANTGALVTCVKNFPGSRGSLLGLLKGYVGLSGAILTQLYHAFYGDDSKSLILLIAWLPAAISFIFLPTIRILNPNSNPQHKELRVFYHLLYISLGLAAFLMILIIVQNKLSFTRVEYVVDGFVVLFLLLLPLAVVFREEFHLWRARKSQAFTDAAANSEFKVVTEALPPQPLPRGISEKEQTSSDCTRNVFKAPNRGEDYTILQALFSIDMWILFIATTFGVGGTLTAIDNLGQIGSSLGYPKRSTTTFVSLVSIWNYLGRAVAGFVSEIFLTKYKFPRPLMLTLVMLVSCVGHLLIAFGVPNSLYFASVIIGFCFGAQWPLMFAIISEIFGLKYYSTLYNLGAVASPVGSYILNVKVTGYLYDKEALKQLEGKGLRRKAGEDLSCLGVECYKRAFIIITVSTLIGCFISFILVVRTRKFYKGDIYSKFRVEEQAQSEIAVAMATTTSTSSSVPLETECKATNGDSTLATTSGSVAVTEELCDDKINRKLIVGTHLRPIIWPPAFRLSHMDDSPF 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3177 653 SUPERFAMILY MFS general substrate transporter 27 560 IPR036259 -
Sto13g3177 653 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 588 - -
Sto13g3177 653 Pfam Nodulin-like 27 274 IPR010658 -
Sto13g3177 653 CDD MFS_Mch1p_like 26 545 - -
Sto13g3177 653 PANTHER MFS TRANSPORTER 9 588 - -
Sto13g3177 653 Gene3D MFS general substrate transporter like domains 343 560 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3177 Sto-Chr13 35878568 35883725 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3177 16 568 Nodulin-like Gene Family AT2G39210 67.611 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3177 - - gmx:100818752 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2466 8 16980030 16981357 Sto13g3177 13 35878568 35883725 CCT
Sto13g3177 13 35878568 35883725 Sto8g2463 8 16949026 16953118 ECH
Sto13g3177 13 35878568 35883725 Sto13g3177 13 35878568 35883725 ECH