Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3157 ATGCAATGCTCACTCTGCCTCTCGTCTTTCTCTCTATTCCCTCTCCACAAAACTAGTTCTCTCCCTCTAAAATCTTATCCACTTCACACTTTCTCAGTCAAATCCTCCATTGACAAAAACCCCACCACTAAATCCAACACCACTAGCAATAAATCCGGTTCCTGGGTTAGTCCAGACTGGCTCACTTCCTTGACCAGGTCTCTGACCTTAGGGAAAGACGATTCTGGAATTCCTATCGCCAGTGCCAAACTTGACGATGTTTCTGATCTTCTTGGCGGTGCTCTTTTCCTCCCACTGTTCAAATGGATGAATGAGAATGGACCCATTTACCGACTCGCCGCAGGGCCTAGAAATTTTGTAGTGGTTAGTGACCCTGCCATCGCCAAGCATGTGCTGAGGAATTATGGTAAATATGCCAAGGGTCTCATCGCTGAGGTCTCGGAGTTCCTGTTTGGGTCTGGTTTTGCAATTGCCGAAGGACAACTCTGGACGGTAAGGCGCCGAGCTGTTGTTCCGTCCCTTCACAAACGTTACTTGTCCATTGTAGTTGATCGGGTATTTTGTAGATGTGCTGAGAGATTAGTGGAGAAGCTACAGTCTGATGCACTGAATGGAACTGCTGTTAATATGGAGGCAAAGTTTTCACAGTTGACTCTTGATGTTATTGGTTTGTCGGTATTCAACTACAACTTTGATTCACTTAATGCGGACAGTCCTGTTATTGATGCTGTTTACACTGCATTAAAAGAGGCAGAGGCTCGTTCAACTGATATTTTGCCATATTGGAAGGCAAGTTTCAGTAAAGTTCTTTGTAAGATAATCCCAAGACAAATAAAAGCTGAAAAGGCTGTTCATGAAATTAGGAAAACTGTTGAAGAACTTATTGTAAAATGTAAAGAAATTGTGGAAGCTGAGGGTGAAAGAATTGATGGTAGTGACGAATATGTGAATGATGCTGATCCTAGTATCCTTCGGTTCTTGCTTGCCATAGTAGTAGTGTACTATCTGCAATTGCGGGATGATCTTTTGTCATTACTTGTTGCTGGGCATGAGACCACAGGTTCAGTGTTGACCTGGACACTTTATCTTCTAAGCAAGGATTCTTCCTCATTGgcaaaagcacaagaagaggtaGACAGAGTTTTACAGGGAAGACGTCCTACCTATGAAGACATTAAAGATCTTAAGTACTTAACGCGCTGTATTATTGAGTCACTCCGGCTCTATCCACATCCTCCTGTCTTGATAAGAAGAGCTCAGGTTCCTGACGTGCTTCCTGGAGGTTACAAAGTTGATGCTGGTCAAGATATTATGATTTCTGTATATAACATACATCATTCTTCAGAGGTTTGGGAGAGGGCTGAAGAGTTTTTGCCAGAAAGGTTTGACCTGAATGGGCCAGTACCAAATGAAACAAATACAGATTTCAGATTCATTCCATTCAGTGGAGGACCCCGCAAATGTGTTGGTGATCAGTTTGCTTTATTGGAAGCAATAGTTGCTCTTGCAATCTTTCTACAACACATGAACTTTGAGCTGGTTCCTGGTCAGAATATTAATATGACTACTGGAGCAACAATACATACAACAAATGGCTTGTACATGAAACTGAGCCAACGGCAAAAGTAG 1629 0.4205 MQCSLCLSSFSLFPLHKTSSLPLKSYPLHTFSVKSSIDKNPTTKSNTTSNKSGSWVSPDWLTSLTRSLTLGKDDSGIPIASAKLDDVSDLLGGALFLPLFKWMNENGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGKYAKGLIAEVSEFLFGSGFAIAEGQLWTVRRRAVVPSLHKRYLSIVVDRVFCRCAERLVEKLQSDALNGTAVNMEAKFSQLTLDVIGLSVFNYNFDSLNADSPVIDAVYTALKEAEARSTDILPYWKASFSKVLCKIIPRQIKAEKAVHEIRKTVEELIVKCKEIVEAEGERIDGSDEYVNDADPSILRFLLAIVVVYYLQLRDDLLSLLVAGHETTGSVLTWTLYLLSKDSSSLAKAQEEVDRVLQGRRPTYEDIKDLKYLTRCIIESLRLYPHPPVLIRRAQVPDVLPGGYKVDAGQDIMISVYNIHHSSEVWERAEEFLPERFDLNGPVPNETNTDFRFIPFSGGPRKCVGDQFALLEAIVALAIFLQHMNFELVPGQNINMTTGATIHTTNGLYMKLSQRQK 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3157 542 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 481 490 IPR017972 GO:0005506|GO:0016705
Sto13g3157 542 Gene3D Cytochrome P450 78 542 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g3157 542 PANTHER CYTOCHROME P450 FAMILY 4 115 540 - -
Sto13g3157 542 SUPERFAMILY Cytochrome P450 92 540 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g3157 542 PRINTS P450 superfamily signature 348 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g3157 542 PRINTS P450 superfamily signature 400 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g3157 542 PRINTS P450 superfamily signature 479 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g3157 542 PRINTS P450 superfamily signature 488 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g3157 542 Pfam Cytochrome P450 99 524 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g3157 542 PRINTS E-class P450 group I signature 103 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g3157 542 PRINTS E-class P450 group I signature 217 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g3157 542 PRINTS E-class P450 group I signature 337 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g3157 542 PRINTS E-class P450 group I signature 357 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g3157 542 PRINTS E-class P450 group I signature 440 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g3157 542 PRINTS E-class P450 group I signature 478 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g3157 542 PRINTS E-class P450 group I signature 488 511 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g3157 542 PANTHER CAROTENE EPSILON-MONOOXYGENASE, CHLOROPLASTIC 115 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3157 Sto-Chr13 35748413 35753171 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3157 23 540 Cytochrome P450 AT3G53130 79.808 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3157 K09837 - gmx:100803324 865.144