Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3153 ATGTTGGTGCCTCCGTGGCTTGAACCATTGCTAAGCACATCGTTTTTCAGCGTGTGCCGGATTCACGGAGACGCGGCTAGGAGCGAGTGTAATATGTATTGCCTTGACTGCAATCGCGACGCATTTTGCTTTTATTGCCGTTCATCCAGACACAAGGATCATCAAGTTATTCAGATTAGAAGATCTTCGTATCATGATGTAGTGAGGGTGGGGGAGATTCAGAAGGTATTGGATATAAGTGGAGTACAGACATATGTGATAAACAGTGCACGAGTGCTGTTTCTGAACGAGAGGCCTCAGCCAAAGTCATCTGGGAAAGGAGGAGTAGCTCACATTTGTGAGATTTGTGGAAGAAGCCTCTTGGACCCCTTTCGCTTTTGTTCTTTGGGATGTAAGcttGTGGGAATAAGGAGAAAGGGGGATGCGAGCTTTGGTTTGGAGAGGATGTCAAAGGGATCAGTGTCTTACAGgcaagatgaagaagaagaattgcGTGAAGGGTCACAACAAGATATGTATCCGGCCacgcctcctcctcctccgcctGCTTCAACTGCAAGGAGAAGAAAAGGCATTCCTCACAGGGCTCCATTTGCCTCCTAA 603 0.4345 MLVPPWLEPLLSTSFFSVCRIHGDAARSECNMYCLDCNRDAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVGEIQKVLDISGVQTYVINSARVLFLNERPQPKSSGKGGVAHICEICGRSLLDPFRFCSLGCKLVGIRRKGDASFGLERMSKGSVSYRQDEEEELREGSQQDMYPATPPPPPPASTARRRKGIPHRAPFAS 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3153 200 MobiDBLite consensus disorder prediction 149 200 - -
Sto13g3153 200 Gene3D Classic Zinc Finger 17 62 - -
Sto13g3153 200 Pfam PLATZ transcription factor 60 133 IPR006734 -
Sto13g3153 200 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 199 - -
Sto13g3153 200 SUPERFAMILY B-box zinc-binding domain 17 61 - -
Sto13g3153 200 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 199 - -
Sto13g3153 200 MobiDBLite consensus disorder prediction 153 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3153 Sto-Chr13 35734332 35735474 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Sto13g3153 PLATZ 9.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3153 - - gmx:100809455 337.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0981 8 6172640 6173835 Sto13g3153 13 35734332 35735474 CCT