Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3151 ATGTTGCATAAGTCACTTGTTGATTTGGGCTATGAGGTTACTTCCATTCAAGGTGCTCTTGAGCATgaagaaagagacaagattGTCAAGGAGTTCAGAGATGGTCTAACTCAAGTTCTTATATCAACTGATGTTCTTGCTCGAGGCTTTGATCAGCAACAGGTTAATTTGGTTATCAATTATGATCTTCCGGTGAAACATACTGCTGAGTATACCCGTGAACCTGAGCCCGATTATGAGTTATTAGAGTTTGTAATAGTTGTCATATATGACACTGTAACTTCTGTTGTTACATATTTCCACTGTGCTGGGGTAGCAGGGGCTGTATTTAACCTTATATGTGGTGAAAGGGATGAAATTCTTATGGGGAAGATTGAGAAGCACTTTGGCACCCTTGTAACTGAGGTCCGAGAAAAAAGTGTTGAAGACTATAAAGGCGCTCTTAAGGAAGCTGGTTTACTGCAATAA 468 0.3868 MLHKSLVDLGYEVTSIQGALEHEERDKIVKEFRDGLTQVLISTDVLARGFDQQQVNLVINYDLPVKHTAEYTREPEPDYELLEFVIVVIYDTVTSVVTYFHCAGVAGAVFNLICGERDEILMGKIEKHFGTLVTEVREKSVEDYKGALKEAGLLQ 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3151 155 Gene3D - 1 147 IPR027417 -
Sto13g3151 155 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 1 133 - -
Sto13g3151 155 Pfam Helicase conserved C-terminal domain 9 71 IPR001650 -
Sto13g3151 155 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 145 IPR001650 -
Sto13g3151 155 PANTHER DEAD-BOX HELICASE DBP80 1 133 - -
Sto13g3151 155 SMART helicmild6 1 110 IPR001650 -
Sto13g3151 155 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 104 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3151 Sto-Chr13 35722800 35724068 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3151 10 64 Eukaryotic Initiation Factors Gene Family AT3G19760 58.182 1.37e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3151 K18655 - gmx:100784739 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3151 13 35722800 35724068 Sto13g3151 13 35722800 35724068 ECH