Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3134 ATGGGAGACAAGCACGAAGAGGATCGGACTGAGAGCAGCGATTTCACGTCCGAGGACGAAGGCACTGAGGACTATCGACGAGGAGGCTATCACGCTGTGCGAATCGGCGATACCTTCAAGAATGGTCGCTATGTCATTCAGAGCAAGCTTGGTTGGGGGCATTTCTCCACAGTCTGGCTCGCTTGGGACACCCAACTTTCTAGATACGTGGCTTTGAAAGTTCAAAAGAGCGCTCAGCATTACACTGAGGCAGCCATGGACGAAATAACTATTCTGCAACAGATTGCAGAGGGAGACCCagatgataaaaagtgtgtcgTGAAGCTTTTGGATCATTTCAAGCACTCAGGTCCAAATGGACAACATGTTTGTATGGTATTTGAGTACCTTGGGGATAATCTTTTAACTCTTATcaagtattctgattaccgtgGATTGCCTATCAACATGGTTAAAGAGATTTGCTTTCATATTTTGGCGGGATTGGATTACTTACATAAGCAGCTCTCTATCATTCATACTGATTTAAAACCTGAGAACATCCTCCTATTATCAATGATAGATCCATCTAAGGATCCTAGAAAGTCTGGTGCACCCCTCATTCTAACAAATACTAAAGATAAAACAGTACTGGAGTTGGCAATTGGGAAAGACACGAAAACATCAAATGGGGATTTTATACGGAatcataagaaaaaaattagaagaaaagcTAAGCAAGCAGCTCAAGGATGTGCAGATAAGGAAGCTTCTGAGGAAGTTGAGGGGGATCCTGAAACCTCTGGTGCTGTAGATTCATCTTCAAATGCAATACTGAATGCAGTTGACCTCAAGTGCAAATTAGTTGACTTTGGCAATGCTTGCTGGACATATAAACAGTTTACAAGTGATATTCAGACAAGACAATATCGGTGTCCAGAGGTGATCCTTGGATCAAAGTATTCTACTTCAGCGGATCTTTGGTCCTTTGCTTGCATTTGTTTTGAGCTTGCAACTGGTGATGTACTATTTGATCCTCATAGTGGTGATAACTTTGATAGGGATGAGGATCACTTAGCACTAATGATGGAGCTTCTGGGAATGATGCCACGTAAGATTGCACTAGGGGGCCGCTATTCCCGTGACTTCTTTAATAGATATGGTGATTTGAGACACATCCGACGGTTGCGTTTTTGGCCTTTGAGCAAAGTCCTCGTGGAGAAATACGATTTCAATGAGCGAGATGCTAATGACCTGTCGGACTTTTTGGTTCCTATTCTTGACTTTGTTCCTGAGAAACGACCCACAGCTAGTCAGTGCCTTCTTCATCCATGGATCAATGCAGGCCCACGCCTTTTGGAGCCATCGATGCCTTCTTCTAACCACAGCACAGCAGCAGAAGGTGCTGCTTctgaccaaaagaaaaaggataAGGATGAGAGGGAGGCCATGGAGGCTGGGATGGGAAATATCGCCATCAATTCAGATTCTAAGCCACTCAAAGATTTGTCAATGAAAGGCGTCCAAAGCAGTAAGAAGTAG 1521 0.4181 MGDKHEEDRTESSDFTSEDEGTEDYRRGGYHAVRIGDTFKNGRYVIQSKLGWGHFSTVWLAWDTQLSRYVALKVQKSAQHYTEAAMDEITILQQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYSDYRGLPINMVKEICFHILAGLDYLHKQLSIIHTDLKPENILLLSMIDPSKDPRKSGAPLILTNTKDKTVLELAIGKDTKTSNGDFIRNHKKKIRRKAKQAAQGCADKEASEEVEGDPETSGAVDSSSNAILNAVDLKCKLVDFGNACWTYKQFTSDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLSKVLVEKYDFNERDANDLSDFLVPILDFVPEKRPTASQCLLHPWINAGPRLLEPSMPSSNHSTAAEGAASDQKKKDKDEREAMEAGMGNIAINSDSKPLKDLSMKGVQSSKK 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3134 506 MobiDBLite consensus disorder prediction 462 478 - -
Sto13g3134 506 Gene3D Phosphorylase Kinase; domain 1 30 129 - -
Sto13g3134 506 MobiDBLite consensus disorder prediction 240 265 - -
Sto13g3134 506 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Sto13g3134 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Sto13g3134 506 ProSiteProfiles Protein kinase domain profile. 44 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3134 506 MobiDBLite consensus disorder prediction 446 506 - -
Sto13g3134 506 MobiDBLite consensus disorder prediction 447 461 - -
Sto13g3134 506 MobiDBLite consensus disorder prediction 1 23 - -
Sto13g3134 506 CDD STKc_SRPK 33 439 - -
Sto13g3134 506 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 268 500 - -
Sto13g3134 506 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 248 - -
Sto13g3134 506 PANTHER SERINE KINASE-LIKE PROTEIN 11 248 - -
Sto13g3134 506 PANTHER SERINE KINASE-LIKE PROTEIN 268 500 - -
Sto13g3134 506 Gene3D Transferase(Phosphotransferase) domain 1 98 439 - -
Sto13g3134 506 SMART serkin_6 44 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3134 506 SUPERFAMILY Protein kinase-like (PK-like) 39 453 IPR011009 -
Sto13g3134 506 Pfam Protein kinase domain 44 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3134 506 Pfam Protein kinase domain 269 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3134 Sto-Chr13 35626360 35631089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3134 10 505 EF-hand Containing Proteins AT5G22840 66.350 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Sto13g3134 Pkinase 3.6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3134 K08832 - gmx:100810777 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3134 13 35626360 35631089 Sto13g3134 13 35626360 35631089 ECH