Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3124 ATGAACAACAACATTAATCACAGTCCTTATGCCTTGGCCTTGCCTTTGGTAATTTTAGTATTCCTCTGTTTCGTGCAGTGTTTGGGTCATACTCAAAATGACACGCGCGCTCTCACCCACTTCCGCCTTCAAGCCGACTCCCATGGCTACCTCAGCCCCAATTGGACCGGCGCCGACGCCTGCGCCGCCTTCTGGCGCGGCGTTCAATGCTCCCCCATTGGCCGAGTCGTGGGCATCGAGCTTCCTTCCCTTAATCTCCGAGGTCCTCTCGATTCGCTATCCCCATTAAGCTACTTGCGCTTCCTTGACCTCCACGATAACCGCTTAAACGGCAGCGTTGCGCCTCTCTCTAACTGCACCAGTCTCGAGCTCCTTTATCTCTCCGGAAACGACCTCTCCGGCGAGATCCCACCGGAGGTAGCTTCACTCACTCGTCTACTCCGGCTTGACCTCTCCGACAATAACATCCGAGGCCCGATTCCTAGTGAACTGTCCAAACTGACTGGCCTTCTCACGCTTCGGCTACAGAACAATGAACTCTCTGGCCAAATCCCTGATCTCTCTGTTTCTCTCGAGAATCTCAAGGAGCTCAATATGACTAACAACGAGTTTCGCGGAGGCTTACCCGATGCAATGTTGAAGAAATTCGGCGATGTAAGCTTCTCAGGGAACGAAGGTCTATGCGGGTCCACCCCATTGCCGGTATGCACATCCCCAGAGAATCCtgatccttcttcttcttcttctccagcaTCGGTTCCCACAGTTCCTTCCAACCCAAACTCGTTACCCCAAACAAGCACAATCACTCCACCGAAAAGCCAATCTCGAAAGGGATTAACTCCCGGGGCTATAGTGGCCATTGTGGTGGGGAACTGCGTGGTGTTGCTTGTGATAACCTCTTTCGTGGTGGCTCACTGTTGCGCCAGAGGAGGAAGAAGCTCTAATTCCATGGTGGGTAGCGAGATTGGGAAGAGGAAAAGTGGGAGCAGCTATGGGAGCGAGAAGAAGGTGTATGCGAATGGAGGTGGAGATAGTGATGGGACAAGTGGGACGGAGCGAAGCAAGCTTGTGTTCTTCGATCGAAGGAGTCAATTCGAGCTGGAGGATTTGCTGCGAGCATCGGCGGAGATGTTGGGGAAAGGAAGCTTAGGGACAGTGTACAAGGCAGTTCTGGACGATGGATGTACCGTAGCCGTGAAAAGGCTTAAAGACGCAAACCCATGCGCCAGGAAGGAGTTCGAGCAGTACATGGATGTGATTGGAAAGCTCAAGCACCCTAACATTGTGAGACTCAGAGCCTATTACTATGCCAGAGAAGAAAAGCTTCTTGTCTTTGATTATCTCCCCAACGGAAGCTTGCATTCTCTTCTTCACGGAAACCGTGGTCCGGGTAGGATTCCATTAGATTGGACTACAAGAATAAGCTTGGTGTTAGGGGCGGCCAGAGGAGTAGCTCGGATTCACGCAGAATACAGCGCAGCTAAAATACCTCACGGAAACATCAAATCTTCCAACGTTGTACTTGACAAGAATGGCGTTGCTTGCATCTCAGACTTCGGCTTGTCTCTGTTACTTAACCCTGCTCACGCCATTGCAAGATTGGGTGGATACAGAGCTCCGGAGcaagaagaaatgaagagaCTGTCTCAGGAGGCGGACGTGTACAGTTTTGGAGTGTTACTATTGGAAGTTCTGACAGGGAAAACCCCATCGCCACCGAATCCCAATCCGAATCCTGCTAGGTTGGTTGAAGAGGAAGAAGCAAGAATGGATCTTCCGAAATGGGTGCGATCTGTGGTGAAGGAAGAGTGGACGGCGGAAGTGTTTGATCAAGAATTGTTGAGGTACAAGAACATAGAGGAAGAGCTTGTGTCGATGCTGCATGTGGGGTTGTCTTGTGTGGTGACTGAACCACACAACAGGCCAACAATGGCGGAAGTTGTTAAGATGATTGAAGATATCAGGGTTGAGCAATCTCCTCTGGGAGAGGATTATGATGAGTCCCGCAATTCACTTTCACCTTCCCTTCCTACCACTGAAGATGGACTAGCCTAG 2058 0.4995 MNNNINHSPYALALPLVILVFLCFVQCLGHTQNDTRALTHFRLQADSHGYLSPNWTGADACAAFWRGVQCSPIGRVVGIELPSLNLRGPLDSLSPLSYLRFLDLHDNRLNGSVAPLSNCTSLELLYLSGNDLSGEIPPEVASLTRLLRLDLSDNNIRGPIPSELSKLTGLLTLRLQNNELSGQIPDLSVSLENLKELNMTNNEFRGGLPDAMLKKFGDVSFSGNEGLCGSTPLPVCTSPENPDPSSSSSPASVPTVPSNPNSLPQTSTITPPKSQSRKGLTPGAIVAIVVGNCVVLLVITSFVVAHCCARGGRSSNSMVGSEIGKRKSGSSYGSEKKVYANGGGDSDGTSGTERSKLVFFDRRSQFELEDLLRASAEMLGKGSLGTVYKAVLDDGCTVAVKRLKDANPCARKEFEQYMDVIGKLKHPNIVRLRAYYYAREEKLLVFDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGVARIHAEYSAAKIPHGNIKSSNVVLDKNGVACISDFGLSLLLNPAHAIARLGGYRAPEQEEMKRLSQEADVYSFGVLLLEVLTGKTPSPPNPNPNPARLVEEEEARMDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLSCVVTEPHNRPTMAEVVKMIEDIRVEQSPLGEDYDESRNSLSPSLPTTEDGLA 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3124 685 MobiDBLite consensus disorder prediction 314 328 - -
Sto13g3124 685 SUPERFAMILY Protein kinase-like (PK-like) 377 652 IPR011009 -
Sto13g3124 685 MobiDBLite consensus disorder prediction 234 277 - -
Sto13g3124 685 Gene3D Transferase(Phosphotransferase) domain 1 449 672 - -
Sto13g3124 685 MobiDBLite consensus disorder prediction 313 350 - -
Sto13g3124 685 PANTHER LRR RECEPTOR-LIKE KINASE 9 676 - -
Sto13g3124 685 ProSiteProfiles Protein kinase domain profile. 373 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3124 685 Gene3D Ribonuclease Inhibitor 117 237 IPR032675 -
Sto13g3124 685 Pfam Protein kinase domain 377 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3124 685 Gene3D Ribonuclease Inhibitor 26 116 IPR032675 -
Sto13g3124 685 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 676 - -
Sto13g3124 685 Gene3D Phosphorylase Kinase; domain 1 347 448 - -
Sto13g3124 685 SUPERFAMILY L domain-like 33 213 - -
Sto13g3124 685 MobiDBLite consensus disorder prediction 660 685 - -
Sto13g3124 685 MobiDBLite consensus disorder prediction 232 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3124 Sto-Chr13 35584049 35586196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3124 32 681 Receptor kinase-like Gene Family AT2G36570 67.164 0.0 877
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto13g3124 Pkinase 1.8e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3124 - - zju:107432046 985.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1001 8 6292987 6297773 Sto13g3124 13 35584049 35586196 CCT
Sto13g3124 13 35584049 35586196 Sto13g3124 13 35584049 35586196 ECH