Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3116 ATGTTGCGAGGGGCGGTTTCTGCTTTGTATAGTTTCGTGCCAAGAATGGAATTTAGAACATGGGGTCGATTTGAGATTTTATCTTTGTCTGGATCATTCACAGTCTCAGATAGCGGCGGCATAAAAAGTCGAAGCGGTGGCTTGAGTGTTTCACTGGCTGGCCCTGATGGTCGGGTGATAGGAGGTGGTGTTGCTGGTTTATTAACAGCTGCTAGCCCCATTCAAATTGTGGTGGGAAGCTTCATGGCGCATAGTTACAAGACACAGAAAAGGAAGCAACATCGTGAGAACATTGTGGGATCCCCAGTTACTGGTGCAGATACAGTGACAGCACCAAAACCAATCTCACAAGCAAACTTTGAGGGTGGTGAAAATTGTTTGAATCCCACGTTCCAGCAGCTTCAAGAACAAAGCCAGAGAGAATCAGACAACGTTACAAGTAGTGATAAACAGAACTTGGATGGCACTCCTAGTGGTTCTGATTGGAATGGATTTGAAGATTTGTCGGATCAGGGGCCAACCCCAGACATCAATATATCTTTGCCTGGGGAATAG 555 0.4595 MLRGAVSALYSFVPRMEFRTWGRFEILSLSGSFTVSDSGGIKSRSGGLSVSLAGPDGRVIGGGVAGLLTAASPIQIVVGSFMAHSYKTQKRKQHRENIVGSPVTGADTVTAPKPISQANFEGGENCLNPTFQQLQEQSQRESDNVTSSDKQNLDGTPSGSDWNGFEDLSDQGPTPDINISLPGE 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3116 184 ProSiteProfiles PPC domain profile profile. 1 102 IPR005175 -
Sto13g3116 184 MobiDBLite consensus disorder prediction 92 184 - -
Sto13g3116 184 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 22 183 - -
Sto13g3116 184 CDD DUF296 22 81 IPR005175 -
Sto13g3116 184 SUPERFAMILY AF0104/ALDC/Ptd012-like 20 92 - -
Sto13g3116 184 MobiDBLite consensus disorder prediction 110 167 - -
Sto13g3116 184 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 22 183 IPR039605 GO:0003680
Sto13g3116 184 Gene3D - 3 99 - -
Sto13g3116 184 Pfam Plants and Prokaryotes Conserved (PCC) domain 3 81 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3116 Sto-Chr13 35540299 35541751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3116 22 118 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 59.596 3.15e-28 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3116 - - gmx:100779227 201.83