Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3111 ATGCCTGGTAGAAGATCCAACTACACACTTCTGAGCCAAGTTCCTGATGACCAATTCGGTGGCTCAGCAGCCTTGTCCGGAGCAACTGCTCACACTTCCGTATTTGATTCTTCATCCGGGGACGGTAAGAACAATAGAGGCCGGGTCGACAGAGGGTATGATTGGGATTTAGTTGCTGATCATAGGGTCGCTCAGCAAGGAAATCGGATCGGGAATTTATACTCATCGATCGGCCTGCAGAGGCAGTCTAGTGGTAGTAGTTTTGGTGAAAGCTCGCTATCCGGGGAGTATTATGCTCCAACTCTGTCCACGGCTGCTGCAAATGAGATTGATGCCTTTGGGTACATGCATGATGATGGCTTCAAGGTTGGTGCTGGCACTGGCGTTGGGGGCGACTTTCGAAACAAGTTGACGGAGACTACGGTTAGGACAGGAGGGTCGTATTCAAGTAAAACCTGGGCGCAGCAGACGGAGGAAAGTTATCAGTTGCAGCAGGCTTTGGCACTTCGCCTTTCATCTGAGGCAACCTGTGCTGATGATCCCAATTTTCTCGATCCAGCGCCAGATGAATCCGCTTTAAGGTCGTCATCGTCAAGTTCAGCAGAGGCAATTTCACATAGATTCTGGGTGAATGGCTGCCTATCTTACTTCGACAAAATTCCTGATGGCTTTTACTTAATTCATGGGATGGATCCCTATGTGTGGACTGTGTGCACTGATCTGCAGGAAAATGGCCGAATTCCATCAGTTGAATCACTAAAGTCTATAGATCCCTCCACCAATTTTTCGCTTGAAGTAGTTTTGGTGGATCGGCGTAGTGATCCCAGCTTAAAGGAACTGCAAAATAGAGTACATAGCATTTCTTGTAGCTGCATAACCACAACAGAGGTTGTAGATCATCTTGCCAAGTTGGTTTGCAACCGTATGGGGGGTTCAGCTTCTGTTGGGGAAGATGACTTTGTTTCTATCTGGAGGGAGTGCAGTAATGATCTTAAAGATTGCTTGGGATCTGTTGTTGTTCCAATAGGTAGTCTATCTGTTGGCCTCTGCAGGCATCGCGCTACACTGTTCAAAGTACTAGCTGACACCATTGACCTACCATGTCGAATTGCCAAGGGCTGTAAATATTGCTCAAGAGATGATGCTTCCTCGTGTCTTGTGCAATTTGGGCTTGACAGGGAATATCTTGTTGATTTAATTGGGAAGCCAGGTTATTTGTGCGAGCCGGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTTCTTCACCCTTGCGCTTTCCGAGACTTAAACCAGCTGAACCTACCATTGATTTCAGGTCATTGGCCAAACAGTATTTTTCGGATTGTCTGTCTCTTGAGCTTGTCTTTGATAATGATTCTGCAGCTGTTGCTGATGGGAATTCTGGATTCTCCATACCAGAACCGTTTGATGGGAAGTGCAGGGACAGAAATAATTCTAGGTCAAATTCAAATGACGGCAACAGAACTTCTCGCCGTTCTCTGCATCCCCAAGTTTCTCATTTGAGAACTCAGGAGGGTTCTGATACATTTAAATCTTGCAACCCTCCTCAGAACTTTGTGGACTCCAGAACTATGGGCAAGGATCCACTGCCTACCCCTATAACACTGACAAATCCAAATGTGGATGCTATTGAGGGTAGGAGGTTTGCTGAAGGAAGTCAACTAATTCCTAGTAAAGCTAGTAGAGAGCTTGGTCTTGATATGGAAGATTTGGACATACCTTGGAGTGATCTTGTTTTAAAAGAGAGAATAGGATCAGGTTCTTTTGGAACAGTACATCGTGCTGAATGGAATGGCTCGGATGTTGCTGTGAAAATTTTAATGGAACAAGATTTCCATGCAGAAAGATTCAAGGAGTTTTTAAGGGAGGTTGCAATAATGAAACGCTTGCGGCATCCAAACATTGTTTTATTTATGGGCGCAGTTACTCAGCCTCCCAACTTGTCAATTGTCACAGAATATTTGTCAAGGGGTAGCTTGTACAGGCTGTTGCATAAACCTGGTGCCAGAGAGATGTTGGATGAGAGGCGCAGGCTGAGCATGGCTTATGATGTGGCCAAGGGAATGAATTATCTTCATAAACGAAATCCTCCTATTGTTCATAGAGATCTGAAGTCTCCAAACCTTCTTGTGGACAAGAAGTATACAGTGAAGGTTTGTGATTTTGGTCTTTCACGTCTCAAGGCAAATACATTTCTCTCATCCAAGTCAGCGGCTGGGACTCCTGAGTGGATGGCCCCTGAAGTTCTTCGTGATGAACCGTCAAATGAGAAATCAGATGTTTACAGCTTTGGTGTAATCTTGTGGGAACTTGCAACATTGCAACAGCCATGGAATAATTTGAATCCTGCACAGGTTGTGGCAGCTGTTGGCTTTAAGGGAAAAAGGCTTGAGATTCCTCGTGATTTGAATCCCCAAGTAGCCGCAATAATTGAGGCTTGCTGGGCCAATGAGCCCTGGAAGCGTCCTTCTTTTTCTAGTATAATGGATTCTTTAAGACCATTGATCAAGCCTCCTGCTCCTCAACCTGTTGCAGAGTCAAAGGTGTATATTTCTGTTCTAATTCTGATTAATACTGATTTTCAAGGCAAAGCAAGGGATACCGTCTTTGTTCCCCCAAAATATTGTTTAGATTTAGTCAATGATAATCAGCTTTGCCGGCATTTTGAACAATTTTCTCGCTTATTGGAAGTCGAGCGGAAGGAAACGCTCAGACAATCGGCTGTGCATATCTCATTCAGTCAGAAAACTATGGAACGTAGAGCAAGAAAGGATATGAGAAGAGCAGCATCACGAAGTAAACTGAAGCATTCGAAAACTTGTATAATGAAACAGCTTTGGTATCTGGACATGCGTGGGCCTCGCGTCTCCATCTCCCCAAGAAGAACCACAAGAGATGGATGGAGTCTGCAGTATCGACGAGGGAGCAAGTTGCGATCCAATTGCCAGGAAACAACACCAAGGTCGGCGCTACACATCAATTTGCCGCCTCCAGGATCCCACCTGAGCCAATCCCAACTTCAATGGGCTGTCTCTGGCATCACCAACGATGTAACTATAGCCATAGAGGAAGAGCAAAGGTAA 3108 0.4521 MPGRRSNYTLLSQVPDDQFGGSAALSGATAHTSVFDSSSGDGKNNRGRVDRGYDWDLVADHRVAQQGNRIGNLYSSIGLQRQSSGSSFGESSLSGEYYAPTLSTAAANEIDAFGYMHDDGFKVGAGTGVGGDFRNKLTETTVRTGGSYSSKTWAQQTEESYQLQQALALRLSSEATCADDPNFLDPAPDESALRSSSSSSAEAISHRFWVNGCLSYFDKIPDGFYLIHGMDPYVWTVCTDLQENGRIPSVESLKSIDPSTNFSLEVVLVDRRSDPSLKELQNRVHSISCSCITTTEVVDHLAKLVCNRMGGSASVGEDDFVSIWRECSNDLKDCLGSVVVPIGSLSVGLCRHRATLFKVLADTIDLPCRIAKGCKYCSRDDASSCLVQFGLDREYLVDLIGKPGYLCEPDSLLNGPSSISFSSPLRFPRLKPAEPTIDFRSLAKQYFSDCLSLELVFDNDSAAVADGNSGFSIPEPFDGKCRDRNNSRSNSNDGNRTSRRSLHPQVSHLRTQEGSDTFKSCNPPQNFVDSRTMGKDPLPTPITLTNPNVDAIEGRRFAEGSQLIPSKASRELGLDMEDLDIPWSDLVLKERIGSGSFGTVHRAEWNGSDVAVKILMEQDFHAERFKEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKPGAREMLDERRRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWNNLNPAQVVAAVGFKGKRLEIPRDLNPQVAAIIEACWANEPWKRPSFSSIMDSLRPLIKPPAPQPVAESKVYISVLILINTDFQGKARDTVFVPPKYCLDLVNDNQLCRHFEQFSRLLEVERKETLRQSAVHISFSQKTMERRARKDMRRAASRSKLKHSKTCIMKQLWYLDMRGPRVSISPRRTTRDGWSLQYRRGSKLRSNCQETTPRSALHINLPPPGSHLSQSQLQWAVSGITNDVTIAIEEEQR 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3111 1035 Gene3D Phosphorylase Kinase; domain 1 579 664 - -
Sto13g3111 1035 MobiDBLite consensus disorder prediction 475 541 - -
Sto13g3111 1035 MobiDBLite consensus disorder prediction 490 529 - -
Sto13g3111 1035 ProSitePatterns Serine/Threonine protein kinases active-site signature. 707 719 IPR008271 GO:0004672|GO:0006468
Sto13g3111 1035 ProSiteProfiles Protein kinase domain profile. 586 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3111 1035 ProSitePatterns Protein kinases ATP-binding region signature. 592 613 IPR017441 GO:0005524
Sto13g3111 1035 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1 97 844 - -
Sto13g3111 1035 CDD STKc_MAP3K-like 592 840 - -
Sto13g3111 1035 Pfam Ethylene-responsive protein kinase Le-CTR1 201 407 - -
Sto13g3111 1035 SUPERFAMILY Protein kinase-like (PK-like) 573 839 IPR011009 -
Sto13g3111 1035 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 97 844 - -
Sto13g3111 1035 PRINTS Tyrosine kinase catalytic domain signature 660 673 IPR001245 GO:0004672|GO:0006468
Sto13g3111 1035 PRINTS Tyrosine kinase catalytic domain signature 701 719 IPR001245 GO:0004672|GO:0006468
Sto13g3111 1035 PRINTS Tyrosine kinase catalytic domain signature 748 758 IPR001245 GO:0004672|GO:0006468
Sto13g3111 1035 PRINTS Tyrosine kinase catalytic domain signature 767 789 IPR001245 GO:0004672|GO:0006468
Sto13g3111 1035 PRINTS Tyrosine kinase catalytic domain signature 811 833 IPR001245 GO:0004672|GO:0006468
Sto13g3111 1035 Pfam Protein tyrosine and serine/threonine kinase 587 840 IPR001245 GO:0004672|GO:0006468
Sto13g3111 1035 SMART serkin_6 586 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3111 1035 Gene3D Transferase(Phosphotransferase) domain 1 665 850 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3111 Sto-Chr13 35483501 35495474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3111 1 851 MAP Kinase Kinase Kinase AT5G03730 68.403 0.0 1053
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Sto13g3111 PK_Tyr_Ser-Thr 1.9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3111 K14510 - zju:107432147 1295.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2532 8 17590937 17595057 Sto13g3111 13 35483501 35495474 CCT
Sto13g3111 13 35483501 35495474 Sto13g3111 13 35483501 35495474 ECH