Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3098 ATGGGTTCATTCTCTGGAACTTGTGAAATAGTTGAAGCAGAGGAAGAGCTAAATTCAGGTAAATCTGCAAGGATTTATCATCCACATTATGAATTTAGCATGGGCGAGAAAAGCCAGAAGCTTCCGGTGCTGAAACTAGGAAACAAGGACAATCTAGACAATGATATCAATAAGCTTTTTGAATCAATTACCCTTAAAACTTCAAGGGATTTGGGTCTTTTACCAGATGGTACAAGCCCTAAGATGAAAAATGCCTTAAAAAAGCCAATAACAGTGGGTGTTCCTCGATCTCCACGAGTTGGTTCTTCTGAGCCAGCAACTTTGAAGCAGGCATTGAGAGACTTATGTATATCTAAGGCATCAGAAATGGCTGCTATGAAGCGATTATCAAAGTCAACAACTTCTCCGAGAGTTTCTGAGGTTGGGAAAATAAAGGCATTGTACAATTCAGTTGTAGCTGAATCCAGTCGATTAGGGCCCTCCTCTGTTGAGAGAAAAGAGAGTGGAATTGAAATATCACTGGTGTCAGAAGAAAGCAAATCAATTTCCTTGGAGAAAACTAGCCAGTCCCATCAAACTGCTGATGTCACATCATCCAGTGTCAGTGTTCATTCTTCTCCCGTAACTGCCATTGCAACCACAGAAATTGATACTGCGACTTCATCAATTGAAAGTGATTTGGCAAGTTCATCAAATAAAGTGGGGATTCAATCACAGCAATTGGGTTCAGGTCAAACAGGAAAACAAACATCTGTGTGTTCTCCATCTCTTTCTAATACTGATGGACGCAAAATAGAGTTGCCTGAAAATGGTTCTATCCCTaaaaaattagtaaataaaGCATCCGTGTCAAAGGCTGGGCGTAAAGTTAGGTTGCAAGCATTATCTTCCTCATCTACATCTACTTCAGTAAATGGAAATAGAGTGAGCAAGCTGTCCCACAGTGCTCCGCGTACAGTCAAATCAGTCATAAGGAACAAGAATTTGAACAAGAAGAAACTTAGGCAGGATTCTGGTTCTGCTCCAAGTGGTCCTACATCCAATGAAATGAATAATAGTAAGTCAGTTCCTGGTACAACTCCCCTAGTTTGTGAGAGATGTCGGTGTACTTTAGAGAGTACAAGTAAAGTAAAGATCCAAGATATTGTAGCATCTGACTCTGCCAATTCTGGAGATGGAGCATTCTCGAGTAATGTGCACAATGATGCAAATAAACCTGTTCCAACATCAACTAACTGCAATAGAAGCAAAGCAGTTGCAAAAGTGAAAAAGAACACCAAATTGAAAGAACAACTTGAATTTTCACAAAGTTCAAAGAGCAGTCAAGGTGAGTACAGTAGTAGTACGAGTACCAGTGATGAAAGCAATGTGAGTGGATCTAGTTATGGCAATAGGCCTCACATGTCAAAGGATGTTAGGTGGGAGGCCATACGCCAAGCCCAAGTGCAGCATGGAGTCTTGGGCTTGAGACAGTTCAATCTTTTGAAGAAACTTGGTTGTGGAGACATTGGGACCGTGTATCTTGCTGAACTAATTGGCTCAAATTGCTTATTTGCTATCAAGGTCATGGACAATGAATTTTTGGCTAGAAGGAAGAAGATGTCTAGGGCTCAAACTGAAAGAGACATATTACGCATGCTGGATCATCCTTTTCTACCTACACTCTATGCTCAATTCACATCAGATAATTTGTCTTGTCTGGTCATGGAGTATTGTCCAGGTGGAGATCTTCATGTTCTACGGCAGAAGCAGCTTGGTAGAAGTTTTACTGAGCCAGCAGCGAGGTTTTATGTTGCTGAAGTTCTTCTTGCATTGGAGTACTTGCACATGCTTGGAGTTGTTTACCGTGATCTGAAACCTGAAAACATTCTTGTTCGAGAAGATGGACACATTATGCTTACAGATTTTGACCTGTCACTAAGGTGTGCTGTTAGCCCAACACTTCTGAAATCATCCGTTGATACAGATCCAGCAAAGATTTCTGGTCCTTGTGCACAATCTAGTTGCATTGAGCCATTCTGTATTGAACCATCCTGTCAAGTTTCATGCTTCAGCCCTAGATTCTTACCTGCATCTGCTAAAGCAAGGAAATTAAAAGCTGATCTTGCTTCTCAGATCAGATCATTGCCACAGCTTGTGGCAGAGCCTACTGATGCAAGATCAAATTCTTTTGTTGGTACCCATGAATACTTGGCACCTGAGATCATCAAAGGAGAGGGACATGGAGCTGCAGTTGATTGGTGGACGTTTGGTGTTTTTCTTTATGAACTTTTATACGGTAGAACACCCTTTAAAGGTGCTAATAATGAAGAAACATTAGCTAATGTGGTGTTGCAAGGTCTCAGATTTCCTGACAGCCCATTTGTTAGTTTCCAAGCCAGGGATCTCATAAGAGGGTTGTTGGTGAAAGAGCCTGAAAACCGTTTGGGTTCAGAGAAAGGAGCTGCTGAGATTAAACAACATCCCTTCTTTGAGGGCCTTAATTGGGCATTAATTCGCTGTGCTGTCCCACCAGAGCTTCCAGAATTTTGTGATTTTGGGGTACCGGACATGACCTCGTCACAGGGCAAGGGTAAGTATTTTGAGTGTAAAGCAACAGGAGAACATGTGGAATTTGAGTTGTTCTGA 2628 0.4144 MGSFSGTCEIVEAEEELNSGKSARIYHPHYEFSMGEKSQKLPVLKLGNKDNLDNDINKLFESITLKTSRDLGLLPDGTSPKMKNALKKPITVGVPRSPRVGSSEPATLKQALRDLCISKASEMAAMKRLSKSTTSPRVSEVGKIKALYNSVVAESSRLGPSSVERKESGIEISLVSEESKSISLEKTSQSHQTADVTSSSVSVHSSPVTAIATTEIDTATSSIESDLASSSNKVGIQSQQLGSGQTGKQTSVCSPSLSNTDGRKIELPENGSIPKKLVNKASVSKAGRKVRLQALSSSSTSTSVNGNRVSKLSHSAPRTVKSVIRNKNLNKKKLRQDSGSAPSGPTSNEMNNSKSVPGTTPLVCERCRCTLESTSKVKIQDIVASDSANSGDGAFSSNVHNDANKPVPTSTNCNRSKAVAKVKKNTKLKEQLEFSQSSKSSQGEYSSSTSTSDESNVSGSSYGNRPHMSKDVRWEAIRQAQVQHGVLGLRQFNLLKKLGCGDIGTVYLAELIGSNCLFAIKVMDNEFLARRKKMSRAQTERDILRMLDHPFLPTLYAQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRSFTEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCAVSPTLLKSSVDTDPAKISGPCAQSSCIEPFCIEPSCQVSCFSPRFLPASAKARKLKADLASQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGANNEETLANVVLQGLRFPDSPFVSFQARDLIRGLLVKEPENRLGSEKGAAEIKQHPFFEGLNWALIRCAVPPELPEFCDFGVPDMTSSQGKGKYFECKATGEHVEFELF 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3098 875 MobiDBLite consensus disorder prediction 181 204 - -
Sto13g3098 875 MobiDBLite consensus disorder prediction 387 419 - -
Sto13g3098 875 Gene3D Transferase(Phosphotransferase) domain 1 576 640 - -
Sto13g3098 875 Gene3D Transferase(Phosphotransferase) domain 1 717 833 - -
Sto13g3098 875 PANTHER FLIPPASE KINASE 1-RELATED 1 875 - -
Sto13g3098 875 MobiDBLite consensus disorder prediction 234 359 - -
Sto13g3098 875 SMART serkin_6 492 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3098 875 MobiDBLite consensus disorder prediction 431 465 - -
Sto13g3098 875 Pfam Protein kinase domain 721 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3098 875 Pfam Protein kinase domain 493 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3098 875 MobiDBLite consensus disorder prediction 335 359 - -
Sto13g3098 875 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 875 - -
Sto13g3098 875 MobiDBLite consensus disorder prediction 291 324 - -
Sto13g3098 875 CDD STKc_phototropin_like 490 842 - -
Sto13g3098 875 ProSiteProfiles Protein kinase domain profile. 492 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3098 875 MobiDBLite consensus disorder prediction 387 466 - -
Sto13g3098 875 MobiDBLite consensus disorder prediction 234 265 - -
Sto13g3098 875 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Sto13g3098 875 SUPERFAMILY Protein kinase-like (PK-like) 469 842 IPR011009 -
Sto13g3098 875 Gene3D Phosphorylase Kinase; domain 1 490 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3098 Sto-Chr13 35375959 35380159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3098 1 875 AGC Kinase Gene Family AT2G36350 50.725 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Sto13g3098 Pkinase 3.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3098 - K08286 gmx:100792120 1222.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0823 8 5202804 5203633 Sto13g3098 13 35375959 35380159 CCT
Sto8g2542 8 17692331 17696470 Sto13g3098 13 35375959 35380159 CCT