Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3096 ATGAAGGTGATTGCTGCGTATTTGCTTGCCGTTTTGGGAGGAAACACCTCTCCATCCTCCACTGATATCGAGAAAATCCTTGGCTCTGTTGGAGCTGAGGCTGATTCCGATAAGATTGAACTTCTGTTGTCTGAAGTCAAGGGTAAGGACATAACAGAGCTAATTGCCGCCGGTAGGGAAAAGTTGGCCTCAGTGCCgtgcggtggtggtggtgcagTAGCAGTGGCTGCTGCCCctggtggtggtggtgctgCCGCTCCAGCTGCAGCTGAGCcaaagaaagaggaaaaggTCGAGGAGAAAGAGGAATCCGATGACGACATGGGCTTCAGTCTCTTTGATTAA 345 0.4232 MKVIAAYLLAVLGGNTSPSSTDIEKILGSVGAEADSDKIELLLSEVKGKDITELIAAGREKLASVPCGGGGAVAVAAAPGGGGAAAPAAAEPKKEEKVEEKEESDDDMGFSLFD 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3096 114 Pfam 60s Acidic ribosomal protein 18 113 - -
Sto13g3096 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2A-LIKE 2 114 - -
Sto13g3096 114 MobiDBLite consensus disorder prediction 79 114 - -
Sto13g3096 114 PRINTS Ribosomal protein P2 signature 21 32 IPR001859 GO:0003735|GO:0005840|GO:0006412
Sto13g3096 114 PRINTS Ribosomal protein P2 signature 36 47 IPR001859 GO:0003735|GO:0005840|GO:0006412
Sto13g3096 114 PRINTS Ribosomal protein P2 signature 77 91 IPR001859 GO:0003735|GO:0005840|GO:0006412
Sto13g3096 114 Hamap 50S ribosomal protein L12 [rpl12]. 2 114 IPR027534 GO:0003735|GO:0005840|GO:0006414
Sto13g3096 114 CDD Ribosomal_P2 1 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
Sto13g3096 114 Gene3D - 1 59 IPR038716 -
Sto13g3096 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 2 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3096 Sto-Chr13 35367755 35368402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3096 1 114 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 64.912 2.29e-31 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3096 K02943 - han:110898085 140.198