LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto13g3093	ATGGGACAACTTCCAGAGACTAGAACCTACGCAGTGGAATCCCACCACCACAACTTGCTGGCGACTGCAATTGGAGACCACCAATTGGCCAGAGTGTCCAAAATACATAGCTATGGAAAGAGCTTCAATGGATTTGTAGCAAGACTATTGCCTCATGAAGCAGAGAAGCTTCAAGAGGGAGGATGTGGTATCTGTGTTTCCAAACACACGGCGAAAACTGCACACAACAAGGTCATGggattttctaagaatgccccTCAAAGTGAAGAGATGGTCCAACATAGAAAGTCATATCATTGTGGGCGTCTTGGATACAGTTTCAACGATAAAGGGTATGGACCACCCCCACGCAGATGGAAGGGCAAATGTGTCACTGGAGCTAATTTCACAGGCTGCAACAACAAGGTGATCGGAGCAAAATACTTCAATCTTGATGTAGAATCCTACGACGAGAGTATTAGTCCAGCGGATGAGCAAGGGCACGGCACTCACACGGCGGCCACGGTGGCGGGTGTGCCGGTGGGTGGAGCCAGTCTGTACGGCATAGGGAAAGGCACGGCACGTGGCGGCGTCCCATCTGCCCGCATTGCTGTATACAAAGTTTGCTGGAAGGTGGGGTGCAGCGACATGGACATGTTGGCTGCTTTTGACGAGGCCATCGCTGATGGTGTCAACTTCATATCGGTGTCCATAGGAGGCTTTACAAGGGATGTCTTGAAGGACCCAATAGCCATTGGAGCATTTCATGCTATGAAAAGAGGGGTTCTCACTTCTTGCTCAGCTGGGAATGACGGTCCCAACACTATGACTGTGGAGAACGTCGCTCCTTGGATTCTTACTGTCGCCGCTTCCTCCCTTGATAGGCACTTCTTTACAGACATAGTCCTCGGTAATGGCAACAAAGCAACAGtacgtattatatatatatatatattactacttGCTAATagTGGAGCCCTTGCTGCTGACGTTGGCAATGATATCTATGGTGGAAATGCCAGTGCTTGTGAATATGGGACTCTAAGCAAGGACAAGGTGAAGGGCAGAATTGTGTACTGTCTTGGAGATGAGATGAGGCAGGACCAGGATTATGTGATAGAAGAATTAGGAGGGGCAGGGACCATTGTGGCCTCATCAGAGAAAAAAGATAATTCCCTCACACTTATTATTCCAGGGGCCATTGTGGACTCCAATCCTGTGGGAAAAGCCATTGAACTTTACATCAATTCCACCAAGAATGCTCAGGCTGTTATATTCAAGACAAGAAGTAAAAGAATCCCTGCTCCATTTCTTGCCTCTTTCTCATCCAGAGGTCCTCAACTTCTCATCCCTAACATCCTCAAGCCTGACTTAGCTGCTCCAGGTCTGAACATACTGTCTGCTTATTCCAAATTGGCAACAATAACAGAGTACCCTGAAGACAAGAGGTACAATATCTTCAATATAATATCAGGAACATCCATGGCTTGCCCACATGCTACTGCAGCGGCTGCTTATGTCAAATCCTTCCACCCTGATTGGTCTCCTGCTGCTATTAAATCTGCTCTCATGACCACTGCCACTCCCTTGAAAATAGCCCAAGACGAGCTTGCGGTGCTAGGATCTGGGTCAGGACAGATGAATCCAACAGGAGCACTTCATCCTGGACTAGTATACGATATAAAAATGAACTCCTATGCTGCTTTTCTATGCAAGCAAGGCTACAACAGCACCAATGTGGGTCTACTAATTGGCAGCAAAAGGTTCAATTGCTCCAATGTTAAGCCTCCATTAGGCACTGATGGAATCAATTACCCCACCATGCACATTCAGCTCATGAATCCCAATTCTAGCATCTCAGCAATCTTTCATCGAACAGTGACTAATGTGGGATATGGGCCTTCAACGTACAAGGCTAAAGTCACAACTCCTAGGGGTCTTTCAGTGCAAGTTATCCCTGATACATTGCAGTTTAATCAACCTCACCAGAGGCAGTCGTTCAAGGTTGTCCTGAAAGGGCCCCAAATGCCGGAGGGGACACAGATATTATCTGCATTACTTGAATGGAATGACTCTAGACATAATGTTAGAAGTCCTATACTTGTATATAGGCCACTTTTTATGTTCAACGGAAATTAA	2118	0.4575	MGQLPETRTYAVESHHHNLLATAIGDHQLARVSKIHSYGKSFNGFVARLLPHEAEKLQEGGCGICVSKHTAKTAHNKVMGFSKNAPQSEEMVQHRKSYHCGRLGYSFNDKGYGPPPRRWKGKCVTGANFTGCNNKVIGAKYFNLDVESYDESISPADEQGHGTHTAATVAGVPVGGASLYGIGKGTARGGVPSARIAVYKVCWKVGCSDMDMLAAFDEAIADGVNFISVSIGGFTRDVLKDPIAIGAFHAMKRGVLTSCSAGNDGPNTMTVENVAPWILTVAASSLDRHFFTDIVLGNGNKATVRIIYIYILLLANSGALAADVGNDIYGGNASACEYGTLSKDKVKGRIVYCLGDEMRQDQDYVIEELGGAGTIVASSEKKDNSLTLIIPGAIVDSNPVGKAIELYINSTKNAQAVIFKTRSKRIPAPFLASFSSRGPQLLIPNILKPDLAAPGLNILSAYSKLATITEYPEDKRYNIFNIISGTSMACPHATAAAAYVKSFHPDWSPAAIKSALMTTATPLKIAQDELAVLGSGSGQMNPTGALHPGLVYDIKMNSYAAFLCKQGYNSTNVGLLIGSKRFNCSNVKPPLGTDGINYPTMHIQLMNPNSSISAIFHRTVTNVGYGPSTYKAKVTTPRGLSVQVIPDTLQFNQPHQRQSFKVVLKGPQMPEGTQILSALLEWNDSRHNVRSPILVYRPLFMFNGN	705

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto13g3093	705	Pfam	Subtilase family	138	523	IPR000209	GO:0006508\|GO:0008236
	Sto13g3093	705	Pfam	Fibronectin type-III domain	596	695	IPR041469	-
	Sto13g3093	705	Gene3D	Peptidase S8/S53 domain	106	559	IPR036852	GO:0004252\|GO:0006508
	Sto13g3093	705	PANTHER	CUCUMISIN PROTEIN	1	697	-	-
	Sto13g3093	705	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	1	85	IPR037045	-
	Sto13g3093	705	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	1	697	IPR045051	-
	Sto13g3093	705	ProSitePatterns	Serine proteases, subtilase family, serine active site.	485	495	IPR023828	-
	Sto13g3093	705	Gene3D	-	563	697	-	-
	Sto13g3093	705	Gene3D	-	287	424	-	-
	Sto13g3093	705	ProSiteProfiles	Serine proteases, subtilase domain profile.	1	546	-	-
	Sto13g3093	705	Pfam	Peptidase inhibitor I9	8	58	IPR010259	-
	Sto13g3093	705	CDD	PA_subtilisin_like	293	418	-	-
	Sto13g3093	705	CDD	Peptidases_S8_3	106	521	IPR034197	-
	Sto13g3093	705	PRINTS	Subtilisin serine protease family (S8) signature	157	170	IPR015500	-
	Sto13g3093	705	PRINTS	Subtilisin serine protease family (S8) signature	484	500	IPR015500	-
	Sto13g3093	705	SUPERFAMILY	Subtilisin-like	131	546	IPR036852	GO:0004252\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto13g3093	Sto-Chr13	35353880	35357031	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto13g3093	1	519	Subtilisin-like Serine Gene Family	AT5G03620	55.473	0.0	546

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto13g3093	-		-	aip:107648262	900.582