Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3090 ATGGACTCACACAATCGCCTattctcccttctctctcttttcctatTATTCCTTCTTCTCTCAGgatataatatagGACACTTGGTGTTGCAAGCAGAAGCTCGTAGTCTTCAGAATCCGACAAAACTGTTTGTTTTTGGGGATTCCTACGCTGACACCGGCAACATCGGTAGAGATGGATCAAAATCCTGGAAAACGCCCTACGGTGTAACCTTTCCCGGAAAACCCGCCGGCCGATTCTCCGACGGCAGAGTCCTCACCGACTATATCGCAAAGTATTTAGGAGTGAGATCACCAGTACCGTACAAGTTTAGAAAATCAATGCCAGAATATTTGAAATACGGGATGAACTTTGCGTACGGTGGCACGGGTGTTTTCAATACTTCTTCTCCAAGCCCAAACATGACTCTCCAAATTGATTTTTTGCAAGACTTAATCAACCACAAAGTCTACTCCTCCTATGATCTCTCTAACTCTGTGGCTCTCGTCTCCGTCGCCGGAAATGACTACAGCTTTTATTTGGCCACAAATAATGGCTCCactcagGGGTTAGCGTCGTTCATTTCGTCAGTGGTTAACCAGACGATTAAGAATGTAGTTCGAATCCAAGGGTTGGGAGTTAAGAAAATAGCAGTGAGTGGTCTTCAGCCCCTTGGATGCCTCCCTGAGACCACTGCTTCATCCTCATTCCAAGAGTGCAATGACACCTTTAACACCTTCGTCACTCTCCATAACACACTCTTAACCCAAGCACTCTCCAAACTCAACCAAACCACAAACGGCACTCCCTCCATTGTCGTTCTGGACCTATACGACAGTTTCATGTCGGTACTCAACCACCCTACCACACATAACATCCAGAATGAGTTGAAGCCGTGTTGCGTTGGGGTGAGCAGCGAGTACTCTTGTGGGAGTGTAGACGACAACAACGTCAAGAAATACAGTGTGTGTGATGATCCTAAGTCTGCCTTCTTTTGGGATTTGGTGCATCCAACGCAAGCTGGATGGCATGCCATTTATAACCAATTGCGGGCCACCACTGCTCTTCAACAACTCCAATACTAG 1065 0.4498 MDSHNRLFSLLSLFLLFLLLSGYNIGHLVLQAEARSLQNPTKLFVFGDSYADTGNIGRDGSKSWKTPYGVTFPGKPAGRFSDGRVLTDYIAKYLGVRSPVPYKFRKSMPEYLKYGMNFAYGGTGVFNTSSPSPNMTLQIDFLQDLINHKVYSSYDLSNSVALVSVAGNDYSFYLATNNGSTQGLASFISSVVNQTIKNVVRIQGLGVKKIAVSGLQPLGCLPETTASSSFQECNDTFNTFVTLHNTLLTQALSKLNQTTNGTPSIVVLDLYDSFMSVLNHPTTHNIQNELKPCCVGVSSEYSCGSVDDNNVKKYSVCDDPKSAFFWDLVHPTQAGWHAIYNQLRATTALQQLQY 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3090 354 CDD SGNH_plant_lipase_like 43 343 IPR035669 -
Sto13g3090 354 Gene3D SGNH hydrolase 31 351 IPR036514 -
Sto13g3090 354 SUPERFAMILY SGNH hydrolase 39 343 - -
Sto13g3090 354 PANTHER OSJNBB0059K02.9 PROTEIN 1 354 - -
Sto13g3090 354 Pfam GDSL-like Lipase/Acylhydrolase 43 342 IPR001087 GO:0016788
Sto13g3090 354 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3090 Sto-Chr13 35337955 35340184 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3090 29 339 Pollen Coat Proteome AT1G75930 28.701 6.77e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3090 - - gmx:100788092 478.404