Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3076 ATGGGAATAGCAGAAGGCGAAAGGAAATCGCAATGCGAGAATGAGAAGCAGACCTTGTCATCAATGGGACGGCAATCATCGATTTACTCTCTAACACTTGACGAGTTCCAGAGCACACTATGCGATAGCGGGAAGAACTTCGGGTCCATGAACATGGACGAATTCCTCAGCAGCATATGGAACGCCGAAGAAAACCAAGGCACCAACACCAACACAAACACGAGGATCACCGAATCTTCCACTGAAATAAGGAAGCAGCCGAGCCTTAGTCGTCAGGGCTCTCTCACGCTTCCTTCGCCGCTCTCTAGGAAAACGGTGGAACAAGTGTGGTCTGAGATTCACAGAGCACATCACAATCATCAGCAAGCCCATAATGGTCATATGAATGGCGGCGCCGCGAGTGGTGATGTGCCGAATACCGAATGTGCCCCTCGCCAGCCCACGTTTGGGGAGATGACGCTCGAGGATTTCCTGGTGAAAGCAGGGGTAGTACGGGAATCGTGCGCAAATTCTACAAGCCAGTACGGGATGTATGCCAATACCAACAACAACAACGACTCTGTGATGGGACCCACTTTTGGGGGAAATGTGGTTGCGCCGTACCGGGCGGTGGGGGAGGGTAGGGATCATAATCATAACAACAATGGGTATCCTCGGGCGGGGGTGTGCTATGGGGCGGTGTCGCCGGATGGGTTGGGAAGAAGTGAGAAGTGCGGAGTGGAGATGAGATCAGGGAGGAAGAGGATGATGGATGGGCCGGTGGAGAAGGTGGTGGAGAGAAGGCAGAGGAGGATGATTAAGAACAGAGAGTCGGCGGCCAGATCTAGAGCCAGAAAACAGGCATACACGGTTGAACTAGAAGCTGAACTGAACCAGTTAAGAGAGGTGAACGCCCACCTTAAGCAGGCGCTGGCCCAGCTTGAGAGGAGAAGAAAGCAACAGTGTTTTGAGGAACTGAACATGAGAGTTCATACCAAAGCTCAGAAAGCAAGAGAGAAATTGAGAGCTTTGAGAAGGAACCTCAGTTGTCCTTTGTGA 1038 0.5183 MGIAEGERKSQCENEKQTLSSMGRQSSIYSLTLDEFQSTLCDSGKNFGSMNMDEFLSSIWNAEENQGTNTNTNTRITESSTEIRKQPSLSRQGSLTLPSPLSRKTVEQVWSEIHRAHHNHQQAHNGHMNGGAASGDVPNTECAPRQPTFGEMTLEDFLVKAGVVRESCANSTSQYGMYANTNNNNDSVMGPTFGGNVVAPYRAVGEGRDHNHNNNGYPRAGVCYGAVSPDGLGRSEKCGVEMRSGRKRMMDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLREVNAHLKQALAQLERRRKQQCFEELNMRVHTKAQKAREKLRALRRNLSCPL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3076 345 CDD bZIP_plant_BZIP46 260 314 - -
Sto13g3076 345 Coils Coil 283 313 - -
Sto13g3076 345 Gene3D - 258 309 - -
Sto13g3076 345 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 258 310 IPR004827 GO:0003700|GO:0006355
Sto13g3076 345 MobiDBLite consensus disorder prediction 1 23 - -
Sto13g3076 345 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 263 278 IPR004827 GO:0003700|GO:0006355
Sto13g3076 345 MobiDBLite consensus disorder prediction 63 102 - -
Sto13g3076 345 SMART brlzneu 256 322 IPR004827 GO:0003700|GO:0006355
Sto13g3076 345 SUPERFAMILY Leucine zipper domain 260 309 IPR046347 GO:0003700|GO:0006355
Sto13g3076 345 PANTHER ABA RESPONSE ELEMENT-BINDING FACTOR 12 176 IPR029803 GO:0003700|GO:0005634|GO:0009737|GO:0045893
Sto13g3076 345 PANTHER ABA RESPONSE ELEMENT-BINDING FACTOR 225 344 IPR029803 GO:0003700|GO:0005634|GO:0009737|GO:0045893
Sto13g3076 345 Pfam bZIP transcription factor 260 308 IPR004827 GO:0003700|GO:0006355
Sto13g3076 345 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 225 344 IPR043452 GO:0003700|GO:0045893
Sto13g3076 345 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 12 176 IPR043452 GO:0003700|GO:0045893
Sto13g3076 345 Coils Coil 320 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3076 Sto-Chr13 35294620 35295991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3076 15 315 bZIP Transcription Factor Family AT2G36270 45.500 1.94e-84 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto13g3076 bZIP_1 9.8e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3076 K14432 - gmx:100818567 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1065 8 6727781 6729594 Sto13g3076 13 35294620 35295991 CCT
Sto13g3076 13 35294620 35295991 Sto13g3076 13 35294620 35295991 ECH