Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3032 ATGGGACGTGTCCGCACCAAGACAGTGAAGAAATCTTCACGCCAAGTCATTGAGAGGTACTACTCTCGAATGACCTTGGACTTCCACACCAACAAGAAGATTCTGGAGGAGGTTGCTCTCATTCCCTCTAAGAGGCTCCGCAACAAGATCGCCGGATTCTCAACTCATCTTATGAAGAGGATTCAGAAGGGTCCAGTTCGTGGAATTTCTCTCAAGCTCCAGGAGGAAGAGCGTGAGCGTCGTATGGATTTCGTTCCTGATGTGTCCGCCATTAAGACTGAGCAGATCGAGGTCGACAAGGAGACTATGGACATGCTTAATGCTCTTGGTATGAACGATATTCCAGGGCTTATCCAGGTTGAGCCCGTGCCCGTGCAGCTGCAGACAGGATTTGGTCGTGGTGGATTTGGTGGAGCTaggaggttttag 429 0.4895 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVALIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDKETMDMLNALGMNDIPGLIQVEPVPVQLQTGFGRGGFGGARRF 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3032 142 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
Sto13g3032 142 Pfam Ribosomal S17 1 118 IPR001210 GO:0003735|GO:0005840|GO:0006412
Sto13g3032 142 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Sto13g3032 142 PANTHER 40S RIBOSOMAL PROTEIN S17 1 142 IPR001210 GO:0003735|GO:0005840|GO:0006412
Sto13g3032 142 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Sto13g3032 142 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Sto13g3032 142 PANTHER 40S RIBOSOMAL PROTEIN S17 1 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3032 Sto-Chr13 35026832 35027260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3032 1 140 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 80.000 8.00e-77 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3032 K02962 - csv:101204345 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3032 13 35026832 35027260 Sto13g3032 13 35026832 35027260 ECH