Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3026 ATGAAGctccttccctctcttctcaAGAACACAACACAACCGAGAACCATCAATTCCGCCTACGTGGATGCCACACTGGAACCCCCTCCCCAATCCCTCTGTGCCAAATCAGACACCGAAGAAGGGGATCCAATCGAGACCGTCATTCGCGGCTTGAGATCAGACCGTCTGTTCTTCGAGCCAGGTGAGAGCAGTTCCATATTAGAGGCTAAAGCACCAGCGGCGGCCACAAGCAGCCTAAGCTTAAAGGATAGCGTGCTACTGTCGATGGAATCTGGAGATCCTTATCTGGATTTTCGAAAGTCGATGGAGGAGATGGTGGAGGCTCACGGCGTGAAGGATTGGGAGAATCTGGAGGAGCTTCTGTGTTGGTATTTGAGGGTGAACGCCAAAACCAATCACCGCTATATTCTCGCTGCTTTTGTTGATTTCCTTTTCGCCTCTGAAACTAACTCTGTTTCCAATTCCCATTCTCCCTATTCTCCTCTCTCCTTTTATACTTCCTCTTCTCCGTCTTCGTCCTTTAGTACTCCTTGCGCTTCCTCTACATTAGAAGCTGAGCAATTAGAGGCTGATCATAATGATACTCCTACATCCTCTCTCTCGTTAAACCACCAGATTAGGCATCCAGAAGACGAGGCTTCTTCTTCAACTTCAACTTCAACTCTTTGA 672 0.4673 MKLLPSLLKNTTQPRTINSAYVDATLEPPPQSLCAKSDTEEGDPIETVIRGLRSDRLFFEPGESSSILEAKAPAAATSSLSLKDSVLLSMESGDPYLDFRKSMEEMVEAHGVKDWENLEELLCWYLRVNAKTNHRYILAAFVDFLFASETNSVSNSHSPYSPLSFYTSSSPSSSFSTPCASSTLEAEQLEADHNDTPTSSLSLNHQIRHPEDEASSSTSTSTL 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3026 223 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 86 146 IPR006458 -
Sto13g3026 223 MobiDBLite consensus disorder prediction 177 223 - -
Sto13g3026 223 ProSiteProfiles OVATE domain profile. 88 147 IPR006458 -
Sto13g3026 223 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 15 181 IPR038933 GO:0045892
Sto13g3026 223 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 15 181 - -
Sto13g3026 223 Pfam Transcriptional repressor, ovate 92 146 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3026 Sto-Chr13 34977319 34978068 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Sto13g3026 Ovate 3.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3026 - - tcc:18598361 181.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1110 8 7018679 7029044 Sto13g3026 13 34977319 34978068 CCT
Sto13g3026 13 34977319 34978068 Sto8g2727 8 19354091 19355100 ECH
Sto13g3026 13 34977319 34978068 Sto13g3026 13 34977319 34978068 ECH