Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3025 ATGTCTAACCCCAGAAAGAAGCTTCTTTTAAGCTCTGTTTCTGTCAAACTAGGCTGCAGCAGCTGCAGGAGACCAAAGCTTTCCCACATTTTccacccaaagcccaaacccaagaATCCCTCTTACCAAAAACACAAACTTTaccatctttcttcttcaagTCCCTCTGACAAATACGActcttccaccaccaccaccaccaccaccGTTGACTCCTCGCACTTTTCTGACTCCGACCACTACGGAAGTGCGTGGAGGACCGTCGGCGGTTTCGGCAGAGTCGGCGGCGAAGGCGTGGCGGTGGAGAAAGATTCCGACGACCCTTATCTGGATTTCAGGCACTCGATGCTGCAAATGATATTGGAGAACGAGATATACTCGAAGGATGATCTCCGGGAGCTTCTGAATTGTTTTCTTCAGCTGAATTCTCCATACCACCATGGGGTTATCGTCAGAGCTTTCACTGAGATCTGGAATGGTGTCTACTCTTCCAGAATGAGGTCCAATTCACCTAGATTTCACTTCACTCCTAAGTCACGCGACTTCTGA 549 0.4208 MSNPRKKLLLSSVSVKLGCSSCRRPKLSHIFHPKPKPKNPSYQKHKLYHLSSSSPSDKYDSSTTTTTTTVDSSHFSDSDHYGSAWRTVGGFGRVGGEGVAVEKDSDDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQLNSPYHHGVIVRAFTEIWNGVYSSRMRSNSPRFHFTPKSRDF 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3025 182 Pfam Transcriptional repressor, ovate 105 160 IPR006458 -
Sto13g3025 182 PANTHER TRANSCRIPTION REPRESSOR OFP6-LIKE 1 166 - -
Sto13g3025 182 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 99 159 IPR006458 -
Sto13g3025 182 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 166 IPR038933 GO:0045892
Sto13g3025 182 ProSiteProfiles OVATE domain profile. 101 160 IPR006458 -
Sto13g3025 182 MobiDBLite consensus disorder prediction 51 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3025 Sto-Chr13 34968648 34969226 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Sto13g3025 Ovate 1.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3025 - - mtr:MTR_7g105790 215.312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3025 13 34968648 34969226 Sto13g3025 13 34968648 34969226 ECH