Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3019 ATGCCGATTATTATGGAATGTTCACTTTTTATAAATGCTTTTGTGCATTTGTCCAAGCAGAATGAAACTCTAATAGCAATTAAAGCCCCGCATGGAACCACCTTGGAAGTCCCTGATCCTGAGGAAGCTGTTGATTACCCGCAGAGAAGATATAGAATAATTCTTAGAAGCACAATGGGTCCCATTGATGTCTACCTTGTCAGTCAATTTGAGGAGAAATTTGAAGAGATGAATGGCATTGAGCCTCCCGTAAGCCTCCCACTTTCTTCAAGTTCAGGGTCCAATGAACACCTAACAACAGAAGTGACTCCTGTCGAACAGAATGGAAAGGGACATGAAACTCAAACTCAACTATCTTCTCATACATGTTCTGATCTAAATGCTTCACAAGAGATTGGTGGGGGCATTATGAAAATTGTTCCCTCTGATGTTGATAATGATGCAGATTATTGGCTTCTATCAGATGCTGAAGTTAGCATTACAGATATGTGGAGAACAGATTCTAGTGTTGATTGGAATGGGGTCGACATGCTTCCTCCCGACTTTGGAATCATCTCAAGGCCACAAACTCCGTCATCTGGGTTTGCTGAAGGACCTTCCACATTAGCTAACTCTACTcagagatga 627 0.4115 MPIIMECSLFINAFVHLSKQNETLIAIKAPHGTTLEVPDPEEAVDYPQRRYRIILRSTMGPIDVYLVSQFEEKFEEMNGIEPPVSLPLSSSSGSNEHLTTEVTPVEQNGKGHETQTQLSSHTCSDLNASQEIGGGIMKIVPSDVDNDADYWLLSDAEVSITDMWRTDSSVDWNGVDMLPPDFGIISRPQTPSSGFAEGPSTLANSTQR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3019 208 MobiDBLite consensus disorder prediction 86 123 - -
Sto13g3019 208 Pfam E2F transcription factor CC-MB domain 19 68 IPR032198 GO:0046983
Sto13g3019 208 Gene3D - 13 69 - -
Sto13g3019 208 PANTHER TRANSCRIPTION FACTOR E2FB 20 190 - -
Sto13g3019 208 MobiDBLite consensus disorder prediction 185 208 - -
Sto13g3019 208 SUPERFAMILY E2F-DP heterodimerization region 19 69 IPR037241 -
Sto13g3019 208 MobiDBLite consensus disorder prediction 186 208 - -
Sto13g3019 208 PANTHER TRANSCRIPTION FACTOR E2F 20 190 IPR015633 GO:0000978|GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3019 Sto-Chr13 34951762 34953089 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3019 20 208 E2F-DP Transcription Factor Family AT2G36010 55.000 8.26e-61 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3019 K06620 - gmx:100811762 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3019 13 34951762 34953089 Sto13g3019 13 34951762 34953089 ECH