Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3005 ATGGGGATACCTCAGGCAATGGATTTTCTCAAGGAAAGAGCAGCATTTGTCAAGGATTCACTGCACAAGAGCCAGACCATTACCGACAGCATGGTGGCCATTCTTGGTTCTTTTGATCACCGCCTTTCCGCCCTCGAGACCGCTATGCGTCCAACTCAGATAAAAACGCATTCGATTCGAAGGGCGCACGAAAACATTGACAAGACACTGAAAGCTGCTGAGCTCATTTTGGGACATTTTGAGCAGAGCCGCAAGATTTCAGCGTTGAACTTCCAACCAATGCTTTTCAGTGTTGATTTTGTCCCATTTGCATCAATAACTGAAACACTTGCACTAGCGGAGGCTAAAATATTAAGAGGGCCACATGAAGATCTTGAAAGCTACTTAGAAGCAATTGATCAGTTGAGattcaatattaatttcttCAGCGGCTATAAGAATATCAGAGGTACTGAGAACGTCCTCAGCCATGCTAACAATTTACTTTCTAAAGCTATCTCAAAGCTGGAAGATGAGTTCAGAAATCTCTTGACAAATTACAGCAAGCCTGTTGAACCTGATCGCCTTTTTGACTGCCTTCCAAAAACTCTACGGCCAACAGCTGATGGTGGAGGCAAAAATCATTCTGAAAATCAGAAAAATGCTCTTGAAACCCCTACTTTCACGCCTCCAACCCTCATTCCACCCAGAGTTCTGCCTTTGTTACATGATTTAGCACAACAAATGGTTCAAGCTGGCCATCAACAACAGCTATTTCGAATCTACAAGGACACTCGTGCTGCAGTTCTGGAACAGAGTCTTAGGAAGTTAGGTGTAGAGAGGCTCAGCAAAGATGATGTTCAAAAAATGCAGTGGGAGGTTTTGGAGGCTAAGATTGGGAACTGGATTCATTACATGCGGATTGCTGTCAAATTGCTTTTTTCTGGGGAAAAGAAAATCTGTGATCAAATATTCGAGGGGTTTGATTCTTTGAGAACTCAATGTTTTGCTGAAGTCACTGCTAACAGTGTGGCTATGCTTCTTAGTTTTGGAGAGGCTATTGCTAAAAGCAAGAGATCTCCAGAAAAGTTATTTGTTCTTCTGGATATGTACGAGATAATGAGAGAACTTCAGTCAGAGATTGAGACAATTTTTGGAAGTAAAGCTTGCATTGAAATGCGGGATACTGCATTGAGTTTGACTAAGCGGCTAGCTCAGACGGCCCAAGAAACCTTTGGTGATTTTGAGGAAGCAGTTGAAAAAGATGCCACTAAGACAACTGTGCTAGATGGAACGGTCCACCCTCTAACTAGCTATGTGATCAATTACGTAAAATTCCTATATGATTATCAGTCAACTCTGAAACAACTTTTTCAAGAGTTTGATGCTGGTGATCCAGAAGAGCAATTAGGATCTGTAACTACAAGAATTATGCAGGCTCTTCAAAATAATTTGGATGGAAAATCAAAGCAGTATAAAGATCCAGCATTAACACAGTTGTTTCTTATGAATAATATCCACTACATAGTCAGATCTGTGAGAAGGTCAGAGGCAAAGGAGATGTTGGGGGATGATTGGGTTCAAATACACAGAAGAATTGTGCAGCAGCATGCAAATCAGTATAAAAGGATCTCTTGGGCAAAGATTCTGCAGTGCCTCACTGTCCAAGGTGGAGATAGCAACAGTGGAGTTTCAAGAGCATCGATTAAAGATAGGTTTAAGACCTTTAATATTCAATTTGATGAAATTCATCAAAGACAATCTCAATGGACAGTTCCTGATAGTGAGTTGCGTGAATCTCTAAGGCTGGCTGTTGCTGAAGTCCTTTTGCCTGCTTATAGATCTTTCATTAAACGTTTTGGGCCTATGATAGAGAATGGAAAAAATCCTCAGAAGTACATAAAATACTCTCCTGAGAATCTTGAGCAAATGCtggTGCAGTTCTCGCCTCTTCCTCAAGACATCGAACAACCTAACGTCCAAACAGAGCCTTCCCAGCAACAGCAACAGCAACATTCGTATGAGCCAACGGAGATGATGATCTTAGCGGTGGCGCTCCGGCTGGCCTTAGTCGGAATATTCATGCTTGGGGTTTCTTTTCGTTCAACGCAATCACAATCATACCCACCGCCTCCTCATCCCGTCCCGCTCTCCTTCCTTCTCCGCTCCCTAACAATTCCTCGCTTCAACATCTCGGACGGCGAGTTATCGGCGATTTGGGATGCGAAATTGACGATCTCCAATGCTCCCAACTCCAGCAGCGTCGAGATCGAACGCATGGATGCCTACATTTGGTATGAGGGGAATTCGCAGAACGAAACCCTCGCTTCCATCAGTCCCATCGATCCCCGAGATTTATTCGAAAACGAGGTTTTGGCGATGAAGGCGGAGCAGGAGAAGAGGGTGAATTTGAGGTTTAAGACGACGGGATGGGAGAAGGATCAGCCTATTGTGGACGATACGGTGATTGCAGCAATGGCGGAGGAGAGGATGAGGCGGGGAGTGATTAGGTTTGGTTTGAGTATGAAGGTGAAGGGGGAGCTTAGTTTGGGTGAGTGGGTCATGGAATTCGATATGTACCCGACTTGCTCCGATTTGGAAGTTCGGTTTGATACGGCGGAGCAGGGTGGGGGCGCCACCTTGATACGCCGTGACTTCAGGGAGTGCTCTGGTTCGATCAAATGGGGACATGTGAGAGGGTTGTTATAG 2688 0.4416 MGIPQAMDFLKERAAFVKDSLHKSQTITDSMVAILGSFDHRLSALETAMRPTQIKTHSIRRAHENIDKTLKAAELILGHFEQSRKISALNFQPMLFSVDFVPFASITETLALAEAKILRGPHEDLESYLEAIDQLRFNINFFSGYKNIRGTENVLSHANNLLSKAISKLEDEFRNLLTNYSKPVEPDRLFDCLPKTLRPTADGGGKNHSENQKNALETPTFTPPTLIPPRVLPLLHDLAQQMVQAGHQQQLFRIYKDTRAAVLEQSLRKLGVERLSKDDVQKMQWEVLEAKIGNWIHYMRIAVKLLFSGEKKICDQIFEGFDSLRTQCFAEVTANSVAMLLSFGEAIAKSKRSPEKLFVLLDMYEIMRELQSEIETIFGSKACIEMRDTALSLTKRLAQTAQETFGDFEEAVEKDATKTTVLDGTVHPLTSYVINYVKFLYDYQSTLKQLFQEFDAGDPEEQLGSVTTRIMQALQNNLDGKSKQYKDPALTQLFLMNNIHYIVRSVRRSEAKEMLGDDWVQIHRRIVQQHANQYKRISWAKILQCLTVQGGDSNSGVSRASIKDRFKTFNIQFDEIHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFIKRFGPMIENGKNPQKYIKYSPENLEQMLVQFSPLPQDIEQPNVQTEPSQQQQQQHSYEPTEMMILAVALRLALVGIFMLGVSFRSTQSQSYPPPPHPVPLSFLLRSLTIPRFNISDGELSAIWDAKLTISNAPNSSSVEIERMDAYIWYEGNSQNETLASISPIDPRDLFENEVLAMKAEQEKRVNLRFKTTGWEKDQPIVDDTVIAAMAEERMRRGVIRFGLSMKVKGELSLGEWVMEFDMYPTCSDLEVRFDTAEQGGGATLIRRDFRECSGSIKWGHVRGLL 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3005 895 MobiDBLite consensus disorder prediction 648 667 - -
Sto13g3005 895 MobiDBLite consensus disorder prediction 205 221 - -
Sto13g3005 895 SUPERFAMILY Cullin repeat-like 113 639 IPR016159 -
Sto13g3005 895 Gene3D Exocyst complex component Exo70 105 642 - -
Sto13g3005 895 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 36 88 - -
Sto13g3005 895 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 112 641 - -
Sto13g3005 895 PANTHER EXOCYST COMPLEX PROTEIN EXO70 112 641 IPR004140 GO:0000145|GO:0006887
Sto13g3005 895 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 88 IPR004140 GO:0000145|GO:0006887
Sto13g3005 895 Coils Coil 159 179 - -
Sto13g3005 895 Pfam Exo70 exocyst complex subunit 294 638 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sto13g3005 895 MobiDBLite consensus disorder prediction 200 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3005 Sto-Chr13 34871264 34879327 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3005 1 641 EXO70 exocyst subunit family AT5G52340 76.389 0.0 1009
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3005 K07195 - gmx:100779774 1009.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3005 13 34871264 34879327 Sto13g3005 13 34871264 34879327 ECH